Gene Jann_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2121 
Symbol 
ID3934574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2130110 
End bp2131033 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID637904477 
ProductPfkB 
Protein accessionYP_510063 
Protein GI89054612 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.987568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.281407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG ATGTCGTCAT TCTGGGCGTG TTCGTGGCCG ACACCGCGTA CCGTGCTGAT 
CGCCAGCCAA AGATGGGTGA AACGATCCTG GGCAAGTCAT TCGCGCTGGG GCCGGGCGGG
AAAGGCTCCA ACCAGGCGGT GGCTGCCGGA ATGGCCGGTG GCGACGTCGG GTTCATCACG
AAACTCGGGA AAGATCCGTT TGCCGACATG GCGCTTGCCA CGTGGGACAA GGCCGGGGTG
ACCTCGCTCG CGTCCCAACA TGCCGATAGC TACACCGGGG CGGCATATAT CTTCATCGAA
GAAGCCACGG GTAATAACGC CATCATCGTC AGCCCCGGCA TTGCCGCCAC GATCAGCGTT
GCGGATATCG ACGCCCATGC CAATACGGTC CGCACTGCCA AGGTTTTCAT GACACAGCTT
GAGCAACCCC TGGACGCCGC CGAACACGCA TTGGGCCTGG CGCGCGCTGG CGGGGCCATC
ACCATTCTCA ATCCCGCCCC CGCTGCTGAG CTGCCAGACA GCATGCTGGC CCTGTGCGAT
TACGTGACCC CGAATGAGAC CGAGACCGAG GCGTTGACGG GCATTCCGGT GCAGACCACC
GCCGATGCCA CCCGCGCGGC GGAGGCGCTA TTGGCCCGTG GCGTCAAGGC CGCGATCATC
ACCTTGGGCG AAAACGGCTG CCTTTTTCAC GATGGTCAAA GCGCCGTGCA TATTCCCGCG
ATCTCAGCGG GGCCGGTTGT GGAAACCACA GGTGCAGGCG ATGCGTTCAA CGGCGGGTTT
GCCGCCGCGC TGGCCGAAGG TATGGCGCCA CTTGAGGCGA TCCGGTTGGG CACCGCCACT
GCCGCGATTT CCGTCACCCG GGCAGGCACC GCCCCCTCCA TGCCGGCCCG CTCAGAAATT
GACGCTCTGC TTGCGTCGGG TTGA
 
Protein sequence
MSHDVVILGV FVADTAYRAD RQPKMGETIL GKSFALGPGG KGSNQAVAAG MAGGDVGFIT 
KLGKDPFADM ALATWDKAGV TSLASQHADS YTGAAYIFIE EATGNNAIIV SPGIAATISV
ADIDAHANTV RTAKVFMTQL EQPLDAAEHA LGLARAGGAI TILNPAPAAE LPDSMLALCD
YVTPNETETE ALTGIPVQTT ADATRAAEAL LARGVKAAII TLGENGCLFH DGQSAVHIPA
ISAGPVVETT GAGDAFNGGF AAALAEGMAP LEAIRLGTAT AAISVTRAGT APSMPARSEI
DALLASG