Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2107 |
Symbol | |
ID | 3934560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2115795 |
End bp | 2116529 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904463 |
Product | GntR family transcriptional regulator |
Protein accession | YP_510049 |
Protein GI | 89054598 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0604546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.665186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCGA CGGGCCACCC CAAGGATCAA GGTGAAATCG CGAAGCCTGT TCGGCTATCG TCCCTGTCAT CTTACGAAGG GACTTTGTCG GGCCGCGTGT ACCACAGCCT GAAGGACGCG ATCCTGTCAC TGGCCTATCA GCCAGGCCAG ATTTTGCGCA AGGGCGATAT CTGCGACCAG CTTGGCATAT CCCGCAGCCC GGTATCGGAG GCGGTCACGC GGCTGGCAAC CGAGGGCTTG GTGGATGTGG TGCCCCAGGC CGGGACCTTT GTCGCGCGCT TTTCGATGGA TGAGATCCGC GAAGGCGCGT TCCTGCGAGA GGCGCTGGAA CTTGCGGCGA TCGAGCGGGT CGCCGGCACG ATCACGGATG AGCAAATCAT CTTGCTCAAG CGAAATCTGC GGGTTCAGGA GGCGTTGGTT GAAGACGGTG ATTTTCAGGG CTTCTACAAG ATGGATGCCG ACATGCACGA GATGATCCTG GGGTTCACGG GCTATCGACG GCTGGCCCAG ATGGCCGAAA CAAGCTGGCT TCAGGTCAAC CGCGCGCGGC AGTTGATCCT GCCCAATCCA GGCCGGGTGG CAGACACGCT GGAGGAGCAC CGGTCGATCA TTGCCGCACT TGCGGCGCGT GACAGCGGTG CTGCCCGTCT CGCAACACAA AATCATCTGC GGCAATTGTT GCGTTATCTG GAGCCTCTGG AGCGCGACCA CCCTGAAATG TTCGCGCCGC GATGA
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Protein sequence | MLSTGHPKDQ GEIAKPVRLS SLSSYEGTLS GRVYHSLKDA ILSLAYQPGQ ILRKGDICDQ LGISRSPVSE AVTRLATEGL VDVVPQAGTF VARFSMDEIR EGAFLREALE LAAIERVAGT ITDEQIILLK RNLRVQEALV EDGDFQGFYK MDADMHEMIL GFTGYRRLAQ MAETSWLQVN RARQLILPNP GRVADTLEEH RSIIAALAAR DSGAARLATQ NHLRQLLRYL EPLERDHPEM FAPR
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