| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2104 |
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| Symbol | |
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| ID | 3934557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2112790 |
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| End bp | 2114085 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904460 |
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| Product | mandelate racemase/muconate lactonizing enzyme |
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| Protein accession | YP_510046 |
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| Protein GI | 89054595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.429752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.478191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCGC GCATCACCCA TGTCACAACC CATGATGTCC GTTTTCCGAC GAGCCGTACT
CTGGATGGCT CTGACGCGAT GAACGAGGCG CCTGACTACT CTGCTGCTTA TGTCGTGTTG
CACGTCGATC ATGGTCCCGA CGGCCATGGC ATGACCTTCA CCATCGGGCG CGGGAATGAG
ATCTGTTGTT CCGCAATCGA AGCGCTTGGG ACGCTTCTTG TGGGCCGCGA GGTTGAGGGG
CTGTTCGCGG ATATGGGCGC GGTCTGGAAA CTGGTAACAG GTGACAGTCA GCTGCGCTGG
ACCGGCCCGG AAAAGGGCGT GATCCACCTT GCCGGGGCTG CCGTGATGAA CGCGGTCTGG
GACATGTATG CCAAACATGC GGGCCAACCG GTCTGGCGTT TGTTGGCGAC GATGTCGCCC
GCCGATATGG TGGCGCTGGT GGATTGGCGC TATCTGGCTG ACGCGCTGCC CCCTGAAGAG
GCGCTGGAGC GCTTGCAGGA CAAGGCCCCG GGACGGGCTG CGCGGATGGC GGAGATGGAG
GCCAATGGCT ATCCCGCCTA TACGACCTCC GCCGGGTGGC TCGGCTATTC AGACGAAAAG
ATCAAGACGC TGATGCGCGC GGCGCTGGCG GACGGCTGGA CCCATTTCAA GATGAAGGTC
GGCGCGAATA TCGAGGATGA CATCCGCCGC GCGGCGATCA TCCGCGAAGA GATCGGGCCG
GAGCGGTTCT TGATGATGGA TGCAAATCAG GTCTGGGGCG TGGAAGAGAC CATTTCCAAC
ATGTCCCGGC TGGCCACATT CGACCCGTGG TGGATCGAAG AGCCGACCAG CCCCGACGAT
ATCCTTGGCC ATGCCCGCAT CGCACGCGAG GTTGCGCCGA TCAAGGTCGC AACCGGCGAG
CATTGCCACA ACGCCGTCAT GTTCAAGCAG TTGTTGCAGG CCGATGCGAT CAGCTTCTGT
CAGGTCGACA GCTGCCGTCT GGCTGGTCCG AATGAGATTC TGGCTGTCAT GCTGATGGCC
GATAAATTCG GCGTTCCCGT CTGCCCCCAC GCGGGTGGTG TCGGCTTGTG CGAGTTGATC
CAGCACATGA GTTTTGTGGA CTACATCGCG GTGTCCGCGA ACCTTGATAA TCGCGTGCTG
GAATATGTGG ACCATTTGCA TGAGCATTTC GTCGACCCGG TTCGCACCAA GAACGGTCGG
TATCTGCCAC CCGCAATGCC CGGCTTCTCG GTGGAGATGA AACCCCACAG CATCGCGCGC
CACACGTTCC CCGGCGGCGC GGTGTGGCAA GCCTAG
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| Protein sequence | MSARITHVTT HDVRFPTSRT LDGSDAMNEA PDYSAAYVVL HVDHGPDGHG MTFTIGRGNE
ICCSAIEALG TLLVGREVEG LFADMGAVWK LVTGDSQLRW TGPEKGVIHL AGAAVMNAVW
DMYAKHAGQP VWRLLATMSP ADMVALVDWR YLADALPPEE ALERLQDKAP GRAARMAEME
ANGYPAYTTS AGWLGYSDEK IKTLMRAALA DGWTHFKMKV GANIEDDIRR AAIIREEIGP
ERFLMMDANQ VWGVEETISN MSRLATFDPW WIEEPTSPDD ILGHARIARE VAPIKVATGE
HCHNAVMFKQ LLQADAISFC QVDSCRLAGP NEILAVMLMA DKFGVPVCPH AGGVGLCELI
QHMSFVDYIA VSANLDNRVL EYVDHLHEHF VDPVRTKNGR YLPPAMPGFS VEMKPHSIAR
HTFPGGAVWQ A
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