Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2101 |
Symbol | |
ID | 3934554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2110407 |
End bp | 2111078 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637904457 |
Product | major intrinsic protein |
Protein accession | YP_510043 |
Protein GI | 89054592 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.71404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.417665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG ATCGCCGCCT GATGGCTGAA TGGCTTGGCA CCTTTTCGCT TCTGGCCACG GTCATCGGCT CAGGCATCAT GGCAGACCGG CTGGCCGACG GGAACGTGGC CATCGCCCTT TTGGGCAACA CGATCCCGAC CGGCGCGATC CTTGTTGTGT TGATCACCGT CTTCGGCCCG ATCTCCGGCG CGCATTTCAA CCCGGCCGTA ACGCTGTCCT TCGCGCTGCG ACGCGAGATC ACGCCGGGGG ATGCCGGGCT TTATGTCGCC GTGCAGGTCT TTGGCGGCAT CGTGGGTGTT TTGGCGGCCC ATGTGATGTT TGAACACCCA TTGCTCGACC CCTCGACCAC CGCCCGCACG GGGCTAGGCC AATGGGCTGC AGAATTCGTG GCAACCTTCG GCCTTGTTGG CACCATCCTC GCTTGCCTGA AGGCGCGACC ACAGGCGGTG CCGATGGCGG TCGGGCTCTA TATTACGGCG GCCTATTGGT TCACATCGTC GACTTCCTTC GCGAACCCCG CCGTCACCAT CGCGCGCGGG TTCTCGGACA CATTTGCCGG GATCGCGCCC GCAGATGTCG CGGCGTTTAT TGCCGTGCAA CTGGTCGCGG CTGTCCTCGC GACCTGGTTT TTCGGCTGGT TGCTAAATGA AACAGAGGAG GACGTCGCAT GA
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Protein sequence | MTLDRRLMAE WLGTFSLLAT VIGSGIMADR LADGNVAIAL LGNTIPTGAI LVVLITVFGP ISGAHFNPAV TLSFALRREI TPGDAGLYVA VQVFGGIVGV LAAHVMFEHP LLDPSTTART GLGQWAAEFV ATFGLVGTIL ACLKARPQAV PMAVGLYITA AYWFTSSTSF ANPAVTIARG FSDTFAGIAP ADVAAFIAVQ LVAAVLATWF FGWLLNETEE DVA
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