Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2089 |
Symbol | |
ID | 3934542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2098633 |
End bp | 2099343 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637904445 |
Product | alpha/beta hydrolase |
Protein accession | YP_510031 |
Protein GI | 89054580 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.500476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.419915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGC GGCCTCCCCC TCTCCTCCTG TTGCCCGGTA TGATGTGCGA TGCGCGGCTT TTTGCGCCAC AGATCGCGGC GCTGTCGGCC AGGAGGGCCG TGATGGTCGC CCCTTTGACC GGGCGCGATA CCATCGGCGC TCTGGCCCAG GATGTCTTGG GCCAAGCCCC TCAGCAATTC GCGCTTGCGG GCCTCTCGAT GGGGGGGATG GTCGCGATGG AGATCATCGC CCGCGCGCCG GACCGTGTGA CCCACCTTGC CCTGCTCGAC ACCAATCCGA AGGCCGAGCC GCCCGCGCGG GCCCGCGCCC GTGCCCCCCA GATCGAGGCC GTGCGCGCTG GCCATCTGCG CCGTGTGATG CGCGATGAGA TGAAGCCAAA TTATCTGACC GATGGGCCAC GCACGGGTGA GGTCCTGGAC CTCTGCATGG CGATGGCGGA GACGTTGGGG CCAGAGGTCT TTGTCCAGCA GTCCCAAGCG CTTGCCACGC GTCCTGATCA ACAAGAGGCC TTGAGGCGCG TAAACGTACC GACCCTGATC CTGTGTGGGA CCGACGATAC GCTTTGCCCG CCAGGATATC ACGAGCTGAT GCGCGATCTC ATTCCCGGCG CGGAGCTACA GGTCATCCAG GGCGCAGGCC ATTTACCAAC GCTGGAGCAG CCCGAGCGGA CAACTCAGGC GCTGCAAGGC TGGTTGGAGC GTCCGTGCTG A
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Protein sequence | MNLRPPPLLL LPGMMCDARL FAPQIAALSA RRAVMVAPLT GRDTIGALAQ DVLGQAPQQF ALAGLSMGGM VAMEIIARAP DRVTHLALLD TNPKAEPPAR ARARAPQIEA VRAGHLRRVM RDEMKPNYLT DGPRTGEVLD LCMAMAETLG PEVFVQQSQA LATRPDQQEA LRRVNVPTLI LCGTDDTLCP PGYHELMRDL IPGAELQVIQ GAGHLPTLEQ PERTTQALQG WLERPC
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