Gene Jann_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2089 
Symbol 
ID3934542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2098633 
End bp2099343 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID637904445 
Productalpha/beta hydrolase 
Protein accessionYP_510031 
Protein GI89054580 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.500476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.419915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGC GGCCTCCCCC TCTCCTCCTG TTGCCCGGTA TGATGTGCGA TGCGCGGCTT 
TTTGCGCCAC AGATCGCGGC GCTGTCGGCC AGGAGGGCCG TGATGGTCGC CCCTTTGACC
GGGCGCGATA CCATCGGCGC TCTGGCCCAG GATGTCTTGG GCCAAGCCCC TCAGCAATTC
GCGCTTGCGG GCCTCTCGAT GGGGGGGATG GTCGCGATGG AGATCATCGC CCGCGCGCCG
GACCGTGTGA CCCACCTTGC CCTGCTCGAC ACCAATCCGA AGGCCGAGCC GCCCGCGCGG
GCCCGCGCCC GTGCCCCCCA GATCGAGGCC GTGCGCGCTG GCCATCTGCG CCGTGTGATG
CGCGATGAGA TGAAGCCAAA TTATCTGACC GATGGGCCAC GCACGGGTGA GGTCCTGGAC
CTCTGCATGG CGATGGCGGA GACGTTGGGG CCAGAGGTCT TTGTCCAGCA GTCCCAAGCG
CTTGCCACGC GTCCTGATCA ACAAGAGGCC TTGAGGCGCG TAAACGTACC GACCCTGATC
CTGTGTGGGA CCGACGATAC GCTTTGCCCG CCAGGATATC ACGAGCTGAT GCGCGATCTC
ATTCCCGGCG CGGAGCTACA GGTCATCCAG GGCGCAGGCC ATTTACCAAC GCTGGAGCAG
CCCGAGCGGA CAACTCAGGC GCTGCAAGGC TGGTTGGAGC GTCCGTGCTG A
 
Protein sequence
MNLRPPPLLL LPGMMCDARL FAPQIAALSA RRAVMVAPLT GRDTIGALAQ DVLGQAPQQF 
ALAGLSMGGM VAMEIIARAP DRVTHLALLD TNPKAEPPAR ARARAPQIEA VRAGHLRRVM
RDEMKPNYLT DGPRTGEVLD LCMAMAETLG PEVFVQQSQA LATRPDQQEA LRRVNVPTLI
LCGTDDTLCP PGYHELMRDL IPGAELQVIQ GAGHLPTLEQ PERTTQALQG WLERPC