Gene Jann_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2083 
Symbol 
ID3934536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2091727 
End bp2092653 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID637904439 
Producthypothetical protein 
Protein accessionYP_510025 
Protein GI89054574 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.158878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCCG AGTTCGTCCA GTTTTCCCTG ACGCCGATCC TGATCGGGAT GTTCGCGGCC 
ATGGCGTGTG CGCTGCCGGG CAATTTCCTG ATCCTGCGCC GCCAAGCGCT GATTGGTGAC
GCGATCAGCC ATGTGGTGCT GCCGGGTATC GTGGTGGCGT TCCTGATCAC CGGCGTGGTC
AGCACTTGGC CAATGCTTCT GGGGGCTGCC GGGGCTGCAC TTGTCGCCGT GATCCTGATC
GAGGCGGTGC GCCGTCTGGG CAATATCGAG CCCGGTGCCG CCATGGGCGT CGTCTTCACC
TCGCTCTTCG CTGGCGGCGT GTTGTTGCTG GAGCAATCGG ACACATCCTC CGTGCATCTG
GACGTCGAAC ACGCGCTGAT GGGCAATCTG GAGCAATTGA TCTGGCTGCG GGCTGAGGGT
TGGGGATCTG TGCTGGACCC GGTGGCGCTG TCGCATCTGC CGCCCGAATT GCCCCGGATG
GCGGTGGTCT TCGCGCTCAT CGCGGTGCTT ACGGCGGTCT TCTGGCGGCC CCTGAAGCTC
GCCTCCTTCG ATGAGGGGTT CGCCCGGGCC CTTGGCCTGC CAGTGTCACT GATCGGATTG
GGCCTTGTGA CATCTGCGGC TGCCGCAGCG GTCGCGGCCT TCGATGCGGT CGGCTCCATC
ATCGTGATCG CCATGTTCAT CTGTCCCCCC GCCGCCGCAC GCCTGATGAC GAACCGGTTG
GGTCTGCAAG TGGCGTGGAG CCTTGCGTTC GCCTGTCTTT CGGCCATTCT GGGCTACGTG
CTGGCAGGCT ACGGCCCACT TTGGATCGGG GCGTCGGGGT CTGTATCGGC GGCGGGCATG
GTCGCGGTGG TATCGGGCGT GATCCTTGCG CTGGCGTGCC TCTTTGGTCC GGCCCGGGGC
CGGGTGGGCG TGGCGGCCGG AGGGTGA
 
Protein sequence
MGSEFVQFSL TPILIGMFAA MACALPGNFL ILRRQALIGD AISHVVLPGI VVAFLITGVV 
STWPMLLGAA GAALVAVILI EAVRRLGNIE PGAAMGVVFT SLFAGGVLLL EQSDTSSVHL
DVEHALMGNL EQLIWLRAEG WGSVLDPVAL SHLPPELPRM AVVFALIAVL TAVFWRPLKL
ASFDEGFARA LGLPVSLIGL GLVTSAAAAA VAAFDAVGSI IVIAMFICPP AAARLMTNRL
GLQVAWSLAF ACLSAILGYV LAGYGPLWIG ASGSVSAAGM VAVVSGVILA LACLFGPARG
RVGVAAGG