| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2080 |
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| Symbol | |
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| ID | 3934533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2088775 |
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| End bp | 2089725 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904436 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_510022 |
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| Protein GI | 89054571 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.402173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.155389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA CGCTTTCCAC CCTTGTTCCG GCCCTCGCCG TGACGACGAC CCTCGCCCTG
CCGCTGCACG CTCAGGAGCC GCTGAGTATC GTCGCGACTA CGGGCATGAT TGCCGACGCC
GCCACCCAAG TGGGCGGAGA TCTCGTTGAG GTTCAGGCAC TTATGGGGCC GGGTGTTGAT
CCGCACGCCT ACCGTCAGAC CCGGTCCGAC ATCGTGGCGA CGGCGCGGGC GGACATGGTG
TTGTGGCATG GCCTCTATCT GGAAGCGCAG ATGGAGGAGT TTCTGCTCGA CCTCGCCGCG
ACCAATACCG TCATCCCGGT TGCGGAATCT CTGGCGGAAG ACCGCCTGCT TGGCTCCGAG
GATTACGAAG GCCGGTTTGA CCCCCACGTC TGGATGGACC CCACACTTTG GGCCGATGTA
GTCACGCATA TTGCGGTGGC GCTCGGGGAG GCGCAGCCGG ATTCCATCGA CGAGATTACC
GAACGCCTGT CCAGCTATGT CGGTGATATC TCTGTCTTGG CAGCCTATTC GGAAGAGGTG
CTGGCGTCTG TCCCCGAAGC CTCCCGCGTG CTGCTCACGG CCCATGACGC ATTTAACTAT
TTTGGCGCAG CCTATGGCTT TGAAGTCATT GGCATCCAAG GAATTTCTAC GGAATCGGAA
GCTGGATTGC AACGGATCGG AGAGCTGGTG GACATGCTGG TCACCCGCGA TATCGGCGCG
GTTTTCGTGG AAAGCTCGGT CTCGGATCGC AACATTCGCG CGCTCATCGA AGGGGCCGCC
GCGCGGGGTC ATGAGGTGAG CATCGGCGGA GAGTTATTCT CTGACGCCAT GGGCGAAGAT
GGCACCTATG AGGGGACCTG GATCGGCATG ATCGACCATA ACGTGACCAC CATCGCCCGC
GCTCTGGGCG GCGACGCGCC CGAGGGCGGC ATGCAGGGTC TGCTGGAATG A
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| Protein sequence | MNRTLSTLVP ALAVTTTLAL PLHAQEPLSI VATTGMIADA ATQVGGDLVE VQALMGPGVD
PHAYRQTRSD IVATARADMV LWHGLYLEAQ MEEFLLDLAA TNTVIPVAES LAEDRLLGSE
DYEGRFDPHV WMDPTLWADV VTHIAVALGE AQPDSIDEIT ERLSSYVGDI SVLAAYSEEV
LASVPEASRV LLTAHDAFNY FGAAYGFEVI GIQGISTESE AGLQRIGELV DMLVTRDIGA
VFVESSVSDR NIRALIEGAA ARGHEVSIGG ELFSDAMGED GTYEGTWIGM IDHNVTTIAR
ALGGDAPEGG MQGLLE
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