Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2068 |
Symbol | |
ID | 3934521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2077362 |
End bp | 2078759 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637904424 |
Product | uracil-DNA glycosylase superfamily protein |
Protein accession | YP_510010 |
Protein GI | 89054559 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.803704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.600316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCAGAG GCGTCGCGCC CGCCGAGGTG ACCTGGGGCG GCACTGATAC GCCGCGCGGG CTGTTTGATG AGCCGTCATC CGTGGCGCAA AGCGGCGACA CGAGCGTTCC GCGCAGCTTC ATTTCCATGG CCGACAGTGT CGTCTGGCAC AGCGATCCGT CCCGCTTCGC GTGGCTCTAT GCGTTTTTGT GGCGGCTGCG CGACGCCCCG CATCTGATGA CAGATCGCGG TGACGCCGAC CTTGCCCGTC TGCGCGCGAT GGAGAAGAAC GTGCACCGCT GCCAGCACAA GATGAAGGCT TTCGTGCGTT TCCGCGACAT CGGTGAGGCG GAGACCCCCC GCCGGTCCTT TGCCGCCTGG TTCGAGCCGA CCCATCACAC GGTGGAGCCC ACGGCGGGCT TTTTCCAACG ACGTTTCGCC GATATGGACT GGCGCATCAT CACGCCCGAC ATTTCAGCCA TTTTCGAAGG TGGCACGCTG CGGTTCATTG AGGATCAGCC CAAACCGGGC CTGCCCGATG ACGCGAGCGA GGCGCTGTGG ATCACGTATT ATCGCAACAT CTTCAATCCG GCGCGCTTGA AGGTGCAGGC GATGCAGTCC GAGATGCCAA AAAAGTACTG GAAGAACCTG CCGGAGGCCG CTGCGATCCC GGATCTGATC GCCACCGCGC CCGCCCGTGC CCGCGCGATG GCCGAGGCCG CGCCGACCTT GCCGCCAACC CGCATGGCCT CCGCGCAGGA GCAGCAGCGC GCGTTTGCAT CGTCTTGGGA GGGCTCGGAT GATGCGTTTC TGGCAGCGGT GAAGGGCTGC ACGCGCTGTC CGCTCCATCG ACACGCCACG CAGACCGTGC CCGGGGAAGG GCCGGCCAAG GCCGCGCTGA TGATCGTGGG GGAGCAGCCG GGCGATCAGG AGGATTTGCA GGGTCGCCCC TTCGTGGGGC CCGCGGGTCA CGTGTTCGAT CAGGTCGCGG CGGAGGTGGG GTTGGACCGC GCAACCGCCT ACATCACCAA CGCCGTGAAG CATTTCAAGT TCGTGCCACG GGGCAAGCGG CGTTTGCATC AGCGGCCCAA TGCGGGGGAG GTCGCCTATT GCAAATGGTG GCTGGAGGCA GAGATTGCGC GCGTGACCCC CAAGCTGATC CTGGCCATGG GGTCCACCGC GGCGCTTGCA TTGACCGGGT CGGGCAACAA CCTGCTGAAA CGGTGCGGGA CAATTGAAGC CGTCGCCGGG CGACCACCTG TCCTGATCTC TTTGCACCCC TCATACATCT TGCGGATCAA GGATGCCGAT CAGCGGGCGG AGGCCCGGCA GATGTACCAG CGTGATCTCG GGCGCGCCAC ACAGATGGTG CAGGAGCGGG CCGGGCCGAT CGGTCTCGCA GAAAACGGGC CGGAGTGA
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Protein sequence | MARGVAPAEV TWGGTDTPRG LFDEPSSVAQ SGDTSVPRSF ISMADSVVWH SDPSRFAWLY AFLWRLRDAP HLMTDRGDAD LARLRAMEKN VHRCQHKMKA FVRFRDIGEA ETPRRSFAAW FEPTHHTVEP TAGFFQRRFA DMDWRIITPD ISAIFEGGTL RFIEDQPKPG LPDDASEALW ITYYRNIFNP ARLKVQAMQS EMPKKYWKNL PEAAAIPDLI ATAPARARAM AEAAPTLPPT RMASAQEQQR AFASSWEGSD DAFLAAVKGC TRCPLHRHAT QTVPGEGPAK AALMIVGEQP GDQEDLQGRP FVGPAGHVFD QVAAEVGLDR ATAYITNAVK HFKFVPRGKR RLHQRPNAGE VAYCKWWLEA EIARVTPKLI LAMGSTAALA LTGSGNNLLK RCGTIEAVAG RPPVLISLHP SYILRIKDAD QRAEARQMYQ RDLGRATQMV QERAGPIGLA ENGPE
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