Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2067 |
Symbol | |
ID | 3934520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2076061 |
End bp | 2077296 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904423 |
Product | radical SAM family protein |
Protein accession | YP_510009 |
Protein GI | 89054558 |
COG category | [R] General function prediction only |
COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.408571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.630296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAAGT TGAACATGAC TGAAAAACTC GCGATCCTCA GCGATGCCGC GAAATATGAC GCGTCGTGTG CGTCCTCGGG ATCGACCCGG CGGGACTCGC GCGATGGCAA AAGCCTGGGC TCGAATGAGG GCAGCGGTAT TTGCCACGCC TACGCGCCAG ACGGGCGCTG CATCAGCCTG CTGAAGATCC TGATGACGAA TTTCTGCATT TATGACTGCG CCTATTGCAT CAACCGCGTG TCCTCCAACG TCGCCCGCGC GCGGTTTTCG GTGGATGAGG TGGTGAAACT GACGATCGAG TTCTACCGCC GCAACTACAT CGAAGGTCTG TTTCTGTCGT CCGGCGTCAT CAAGTCGCCC GACGCGACGA TGGAAGCGAT GGTGCAGATT GCCCGCCGCC TGCGTCATGA AGAGAATTTT CGAGGGTATA TTCACCTGAA GACCATACCG GATGCGGCCC CTGACCTGAT CGCGGAGGCG GGGCTGCTGG CCGACCGCCT CTCCATCAAT GTGGAGCTGC CCACCGATGC CGCCGTCACC CAATACGCGC CCGAAAAGAA GCCGGAACAG ATCCGCAAAG CCATGGCGGA TGTGCGTCTG CGCAAGCAGG GGGCGGCGGA CAAATCGCAC ACCGGCAAGC GGCCCCCGCG TTTCGCGCCT GCGGGGCAAT CGACGCAAAT GATCATCGGC GCGGACGGGT CGAACGACGC GACGGTTCTG GGCCAATCCA CACGGCTCTA CTCCAGCTAC AAGCTGAAGC GCGTGTATTA TTCTGCGTTC TCACCCATTC CTGACAGCTC TGCCAAACTG CCATTGGTGC GCCCGCCGTT GCAGCGCGAA CACCGGCTCT ATCAGGCGGA TTGGTTGCTT CGATTCTACG GGTTTGATCT GGATGAGATC ACGGCGGTGA CGCCGGACGG CAATCTGGAT CTACAGATTG ACCCGAAAAT GGCATGGGCT CTGGCCCATC GCGGGGTGTT TCCCCTGGAC GTCAACACGG CCCCGCAGGA GATGTTGCTG CGGGTTCCGG GCTTCGGCGT GAAGACCGTC AAGCGCATCC TGTCCACTCG CCGCCATCGC ACGCTGCGAT ACGATGATAT CACGCGGATG GGGGCCTCGA TGAAAAAGGC GCGGGCGTTT GTGACAGCGG GTGGGTGGAG CCCCGGCGCG CTGACCGACA GCGTGAATCT GCGGGCACGG TTCGCGCCCC CGCCCGAGCA GTTGACGCTT CTATGA
|
Protein sequence | MTKLNMTEKL AILSDAAKYD ASCASSGSTR RDSRDGKSLG SNEGSGICHA YAPDGRCISL LKILMTNFCI YDCAYCINRV SSNVARARFS VDEVVKLTIE FYRRNYIEGL FLSSGVIKSP DATMEAMVQI ARRLRHEENF RGYIHLKTIP DAAPDLIAEA GLLADRLSIN VELPTDAAVT QYAPEKKPEQ IRKAMADVRL RKQGAADKSH TGKRPPRFAP AGQSTQMIIG ADGSNDATVL GQSTRLYSSY KLKRVYYSAF SPIPDSSAKL PLVRPPLQRE HRLYQADWLL RFYGFDLDEI TAVTPDGNLD LQIDPKMAWA LAHRGVFPLD VNTAPQEMLL RVPGFGVKTV KRILSTRRHR TLRYDDITRM GASMKKARAF VTAGGWSPGA LTDSVNLRAR FAPPPEQLTL L
|
| |