| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2062 |
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| Symbol | |
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| ID | 3934515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2070741 |
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| End bp | 2071478 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904418 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_510004 |
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| Protein GI | 89054553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.20898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.837706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATA CCCCATCGTC AAACCTGCCT GCGCCGGCGC GGGCGTCCCT GTTTCTTGAT
TTCGACGGAA CGCTCGTTGA CATCGCGCCG ACGCCCGATG GCATTACCGT GCCGGATGAT
CTGGCGGACC TGTTGGCCAT GCTGGACACG GCCCTCGGCG GGCGTCTGGC GCTGGTGTCG
GGGCGGGCCA TCGCCAGTCT TGAGCAGCAC CTGCCGACGT TTCAGGGGAT CATCGTCGGC
GGTCATGGCG CAGAGATGCG GGGGCGCGAT GGGCGCATAG AGCGTCTTGC AGGGGCCGAT
AGCGGTATCG CGGATCTGCA TTTCTGGGCG ACCGGGATTG AAGGCGATTT GGCGGGTGTC
CGGGCGGAGT TGAAACGCAC CGGCGCGGCG CTGCATTTCC GTCAGGCGCC GCAGCACGAG
GATGCGTTGC ACGCAGCCGC GCAGACGTAT CTGGCGACGC ACCCGGATTT GGCGTTGCAG
ATGGCGCACA TGACCGTCGA GCTACGGCCA AAGGATGCCA ACAAGGCCAG CGCGGTGGCG
ACGCTGATGC ACTCGCCCCC CTTTGTGGGC CATCCTCCGA TCTTCGCAGG CGATGACGCG
ACGGATATTC CGGCCATGGA CCATTGCCAA ACCGCAGGTG GCCAAGCGAT CAGCGTCGGT
GGTATCCATG CCGCAGCCGA TATTCACCTG GCCGCACCCC AGGACGTGCG CCGCCTTCTC
AAAGATTGGA TCGTCTGA
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| Protein sequence | MPDTPSSNLP APARASLFLD FDGTLVDIAP TPDGITVPDD LADLLAMLDT ALGGRLALVS
GRAIASLEQH LPTFQGIIVG GHGAEMRGRD GRIERLAGAD SGIADLHFWA TGIEGDLAGV
RAELKRTGAA LHFRQAPQHE DALHAAAQTY LATHPDLALQ MAHMTVELRP KDANKASAVA
TLMHSPPFVG HPPIFAGDDA TDIPAMDHCQ TAGGQAISVG GIHAAADIHL AAPQDVRRLL
KDWIV
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