Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2049 |
Symbol | |
ID | 3934502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2054053 |
End bp | 2054580 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637904405 |
Product | bifunctional deaminase-reductase-like |
Protein accession | YP_509991 |
Protein GI | 89054540 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.366919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCCCA TCATATATGA CGTCGCCGTC TCCTTGGACG GCTATATCTC TGGTCCATCC GGAGACATCT CAAAATTCGC GCACGATGGC CCGGTTGTGG ACGACTACGC CGCGCGCCTG GGCGGCTATA AGACCGCAAT CATGGGCCGA AAGACCTATG AGTTTGGCTA TGATTACGGC CTTGAACCGG GTCAGAACCC GTATCCCAAC ATGAACACAA TCGTTTTTTC CCAGACGCTT GAATGTCCTG AGAGGAGCGA TATCCAGGTC GTGAAGTCTG CCAGCAAATC CGACGTCCTC AGCCTGAAAA AAACGGCCGA TGGGCCAATC TACCTGTGCG GTGGTGGCGC GTTTGCGGGC TGGTTGCTGG GGGAGGGTTT GATAGACCGT CTTGTTCTCA AGAGGGCACC CTGTGTCTTG GGGGGCGGCG TGTCCTTGTT TGGAGGGGGG AGCGCTGCCG CGCCGTTCTC GAAGGTGACG GCAAAAACCT ATGAGAACGG CTACGTTCTG GAGGAATACG ACCTCTGA
|
Protein sequence | MHPIIYDVAV SLDGYISGPS GDISKFAHDG PVVDDYAARL GGYKTAIMGR KTYEFGYDYG LEPGQNPYPN MNTIVFSQTL ECPERSDIQV VKSASKSDVL SLKKTADGPI YLCGGGAFAG WLLGEGLIDR LVLKRAPCVL GGGVSLFGGG SAAAPFSKVT AKTYENGYVL EEYDL
|
| |