| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2047 |
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| Symbol | |
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| ID | 3934500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2051067 |
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| End bp | 2052656 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904403 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_509989 |
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| Protein GI | 89054538 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.101703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.665186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT TCAAACCGGC CCTGCTGTCG GCGATGCTGG CGCTGCCGCT GGCAGCCCCC
GCGGCCCTTG CGGAAACGCC GCCCGAGATC CTGGTGGTCG CGCAGAATAT CGACGACATC
GTCGCGATTG ACCCGGCTCA GGCCTATGAG TTCACCTCTG GCGAGTTGGT GACGAACACC
TATGACCGTC TTGTGCAATA CGATGCCGAA GACACGACCG TGCTGGCCCC CGGTCTTGCC
ACGGAGTGGG AGATTGACGC CGAGGCCAAG ACCATCGTCT TCACCATGCG CGAGGGTGTG
ACGTTCCATT CCGGCAATGC GTTCACGGCG GATGACGTGG TTGGCTCCTT CGCCCGCGTG
GTGCAGTTGA ACCTGACGCC TGCGTTCATC CTGACGCAGC TTGGCTGGAC GCCCGAAAAC
GTCGAGGAGA TGGTGACAGC GGACGGCAAC ACTGTGACCG TGCGCTATGA TGGCGACTTT
TCCCCGGCCT TCGTGATGAA CGTGCTGGCG TCGCGGCCTG CCTCCATCGT GGATATGGAA
ACGGTCATGG CCAACGCGGT TGACGGCGAT ATGGGCAATG CGTGGCTCAA CGCCAACACG
GCGGGCACGG GGCCGTTTTC GCTCAACACC TTCCGCGCGG CAGAGCTGAT CCGCATGGAT
GCCAACCCTG ACTATTTCAA CGGTGCCCCC GCCATCGAGG GTGTAATCAT CCGCCATGTC
GCGGAATCGG CGACACAGCA ATTGTTGCTG GAAGCGGGTG ATGTTGATAT TGCGCGCAAC
TTGACGCCGG ACCAGATCGC GTCACTTGGC GGGGACGAGT TGCAGGTGGA GACGTTCCCA
CAAGCAGCCG TCCACTTCCT GTCGTTCAAC CAGGCGGTCG AAAGCCTAAC GCCCCCCGCC
GTATGGGAAG CCGCGCGCTA TCTGGTGGAT TACGAGGGGA TGACCAACTC GATCATCGCA
GGCCAGATGG AAATCCATCA GGCGTTCTGG CCAGAAGGGT TCCCCGGCGC GTTGACCGAC
ACGCCCTACA CCTATGATCC GGAGCGCGCC GCGCAGATCC TGGAAGATGC AGGGATTGAG
CTGCCGATCA CCGTCACGCT CGATGTGATC AACGCAGCAC CCTTCACCGA TATGGCGCAA
TCGTTGCAGG CGTCTTTCGC CGAAGCGGGC ATCGAGTTCG AAATCCTGCC CGGCACCGGA
TCACAGGTGA TCACCCGCTA CCGCGACCGC AGCCATGAGG CGATGTTGCT CTACTGGGGC
CCGGACTTCA TGGATCCCCA TTCCAACGCC AAAGCCTTCG CCTACAATTC CGACAATCGG
CAGGAAACCT ACACCGCCAC GACGACATGG CGGAACTCCT GGGCGGTGCC GGAAGAGATG
AACGCGATGA CGACGGCGGC CCTGACGGAA TCCGATCCGG CTGTGCGTGA AGAGATGTAT
CTGGAGCTTC AGCGGCAGGT GCAGGCGAAC TCGCCCATCG TGATCATGTT CCAGGCCTCC
TATCAGGTGG GTATGGCCGA GAATGTGTCA GGCTACGTGA ATGGTGCGAC GTCTGACTTC
GTGTTCTACC GGCTTGTCGA CAAAAGCTGA
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| Protein sequence | MKLFKPALLS AMLALPLAAP AALAETPPEI LVVAQNIDDI VAIDPAQAYE FTSGELVTNT
YDRLVQYDAE DTTVLAPGLA TEWEIDAEAK TIVFTMREGV TFHSGNAFTA DDVVGSFARV
VQLNLTPAFI LTQLGWTPEN VEEMVTADGN TVTVRYDGDF SPAFVMNVLA SRPASIVDME
TVMANAVDGD MGNAWLNANT AGTGPFSLNT FRAAELIRMD ANPDYFNGAP AIEGVIIRHV
AESATQQLLL EAGDVDIARN LTPDQIASLG GDELQVETFP QAAVHFLSFN QAVESLTPPA
VWEAARYLVD YEGMTNSIIA GQMEIHQAFW PEGFPGALTD TPYTYDPERA AQILEDAGIE
LPITVTLDVI NAAPFTDMAQ SLQASFAEAG IEFEILPGTG SQVITRYRDR SHEAMLLYWG
PDFMDPHSNA KAFAYNSDNR QETYTATTTW RNSWAVPEEM NAMTTAALTE SDPAVREEMY
LELQRQVQAN SPIVIMFQAS YQVGMAENVS GYVNGATSDF VFYRLVDKS
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