Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2046 |
Symbol | |
ID | 3934499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2050371 |
End bp | 2050988 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904402 |
Product | XRE family transcriptional regulator |
Protein accession | YP_509988 |
Protein GI | 89054537 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.298774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAC CCAAGTCGAA CAACGATCCC GCCCTTGGTG CGCTGATCCG CAAGCGGCGC AAGCAGTTGG ATCTGACGTT GCAGGCGCTG TGCGATGATG CCGGATTGTC CGTCGGCTAC CTGTCCCAGG TCGAACGTGG GCAGGCGACC CCATCGCTTG GCACGCTGGC GCAGATCGCC CAGGGCCTCT CGGTCGAGCT GGAGTATTTC ATTGCCACCC CCAAGCCCGC CGACAGCCTG TCGCGCGGTG GGGCGCGTCC CCAGTTTTCC ATCGATGGGT CGTCTATCCT GTACGAATCC GTCGGCGCGG ATTTCCCGGG GGCCGAATTG TCGTGCTACA TTTTGCATGT GCCGCCCGGC TATGCGTCCG AAGTGGTGCA CCATGAGGGG GAGGAAATCA TCTTCCTGCT GAGCGGTGAA ATCACCCAGA CCTTGGGCGG GCAAAGCTTC ATTCTGCAAC AGGGGGACAG CCTGCATTAT TCCGGCTCAA CCCCCCATTC CTGGTCCAAC GAGACCCAGG CCACCACGCG TATCCTGTGG ACCGGCACGC TGTCGGTTCT GCAACGCAAG GGCGCTGTGA AACTGCCTGA AATGAACCCG GCCAACACCA ATGGCTGA
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Protein sequence | MARPKSNNDP ALGALIRKRR KQLDLTLQAL CDDAGLSVGY LSQVERGQAT PSLGTLAQIA QGLSVELEYF IATPKPADSL SRGGARPQFS IDGSSILYES VGADFPGAEL SCYILHVPPG YASEVVHHEG EEIIFLLSGE ITQTLGGQSF ILQQGDSLHY SGSTPHSWSN ETQATTRILW TGTLSVLQRK GAVKLPEMNP ANTNG
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