| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2044 |
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| Symbol | |
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| ID | 3934497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2048283 |
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| End bp | 2049179 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904400 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509986 |
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| Protein GI | 89054535 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.193699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.806351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACT GGCTTCTGGA CGACAGCCCG TCGTCGCGCA CCCAAGCCGC ATCGGGGCGG
GCGTATCGCA TCACGCTGGA CCTGCTGCGC AACCCCCTGA CCGTGGCGGG TGCGCTGATC
ATCGCCGCAT TGATCCTGAC GGCGATCTTC GCGGATGCCA TCGCGCCGGG CGGACCGGGC
GGCCAGTTCC TGGAGCGCCG CCTGCAACCG CCATCGTCTG AATTCTGGTT CGGCACCGAT
CAATTGGGCC GCGATATCTT TTCCCGTGTG GTCCACGGCG CACAGATCAC GTTGCAGATC
GTGGCTTTGG TGGCCGTCAT ATCCGCCCCC CTCGGCCTGT TGATCGGGGC GATCTCCGGC
TACTTTGGCG GCTGGATCGA CCGGACGCTG ATGGGGGTGA CGGATGTGTT CCTGTCGATG
CCGAAGCTGG TCCTGGCGCT GGCCTTCGCC GCCGCTCTTG GACCGGGGAT CGACAATGCG
ATCATCGCCA TTGCCATCAC CACATGGCCC GCCTATGCCC GCATCGCACG GGCCGAAACG
CTGACGCTGC GCAGGTCCGA ATTCGTCGCT GCCGCGCGGC TCTTGGGGGC GTCGCATACG
CGCGTCATCA CCCGCCACAT CCTGCCACTC TGCACATCGT CGATGATCAT CCGCGTCACG
CTGGACATGG CGGGGATCAT CCTGACGGCC GCCGGGCTTG GCTTTCTGGG CCTTGGCGCA
CAACCGCCCG AACCGGAATG GGGCGCGATG ATCTCGGGCG GGCGGTCATT CATCTATGAC
CAATGGTGGG TCTCCACCTT CCCCGGTTTT GCCATCATCC TCGTGTCGCT GGGGTTCTGT
TTTCTCGGCG ACGGGGTGCG CGATGTGCTG GACCCGAAAT CGGAGCGCAA GGGATGA
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| Protein sequence | MRDWLLDDSP SSRTQAASGR AYRITLDLLR NPLTVAGALI IAALILTAIF ADAIAPGGPG
GQFLERRLQP PSSEFWFGTD QLGRDIFSRV VHGAQITLQI VALVAVISAP LGLLIGAISG
YFGGWIDRTL MGVTDVFLSM PKLVLALAFA AALGPGIDNA IIAIAITTWP AYARIARAET
LTLRRSEFVA AARLLGASHT RVITRHILPL CTSSMIIRVT LDMAGIILTA AGLGFLGLGA
QPPEPEWGAM ISGGRSFIYD QWWVSTFPGF AIILVSLGFC FLGDGVRDVL DPKSERKG
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