| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2042 |
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| Symbol | |
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| ID | 3934495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2046710 |
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| End bp | 2047459 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904398 |
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| Product | ABC transporter related |
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| Protein accession | YP_509984 |
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| Protein GI | 89054533 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.574397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGTCC CCGGCCCGGC CATTTCGATG GCAGATCTCG ACATCGCCTA CGACGGTCTG
CGAGTCGTGC AAGGCGTCAC GATTGACGTC GCACGCGGAG AGAGTTTCGC GCTGGTGGGC
GAAAGCGGAT CGGGGAAATC CACTGTTCTC AAGGCGCTGT GTGGCCTAGC GCCGGAATGG
ACCGGAACGA TGGAGATCCT TGGCCAGCCT GGTCCACATC GGCCCAACCG CGCACTGGCC
AGGCGATGCC AGATGGTGTT CCAGGACCCG TTCGGCTCTC TCCATCCCCG CAAGACCGTG
GATGCGGTCC TGTCCGAGCC GCTGGCAATC CATGGCGTCA AGGATCAGGA TACCCGGGTC
AAACAGGTGC TCTCGGATGT CGGCCTTGAT GGGCGCTTCC GGTTTCGCTA CCCGCACCAG
ATGTCAGGCG GCCAACGTCA GCGCGTCGCC ATTGCCCGCG CGCTGATGCT GGAGCCGGAG
GTGATGCTGC TGGACGAGCC CACCAGCGCG CTTGATGTCA GCGTGCAGGC CGAAATCCTG
AACCTGCTCA AACGCCTGCG GGCGGAGCGC GGGCTGACCT ACCTGATGGT CACGCATAAT
CTGCCCGTGG TCAGCTTCAT GTGCGACCGC ATGGCGGTGA TGAACAAGGG CCGGATTGTC
GAGATCGCGC CGTCCACCGC GCTCCATGAC GGCAGCTTCG AAGATCCGTA TTCCCAGACG
CTCTACGCCG CCAGCGGCGG TCCCGGTTGA
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| Protein sequence | MTVPGPAISM ADLDIAYDGL RVVQGVTIDV ARGESFALVG ESGSGKSTVL KALCGLAPEW
TGTMEILGQP GPHRPNRALA RRCQMVFQDP FGSLHPRKTV DAVLSEPLAI HGVKDQDTRV
KQVLSDVGLD GRFRFRYPHQ MSGGQRQRVA IARALMLEPE VMLLDEPTSA LDVSVQAEIL
NLLKRLRAER GLTYLMVTHN LPVVSFMCDR MAVMNKGRIV EIAPSTALHD GSFEDPYSQT
LYAASGGPG
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