Gene Jann_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2040 
Symbol 
ID3934493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2045522 
End bp2046022 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID637904396 
ProductOsmC-like protein 
Protein accessionYP_509982 
Protein GI89054531 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.246305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.745098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTA CCCCAGATCA GATGCCTGAC CGCGCCGAAG TGGTCTTCAC CTGCAATGGC 
AAGGCGGTGG GCAAGATGCG GAACGAGTTG GACGTGGCCA TGGTAAAACC GTTCGAGGAG
CGGTTTGCGC TGGCCACGGA CGAGGGCGCG TTCCATGGCG GGGATGCGTC CGCGCCGCCC
CCGTTGGCGC TGTTCATCGC GGGATTGACC GGCTGCGTCA TGACGCAGAT CCGGGCCTTT
GCGAAACGCC TGAAGGTCAC AGTGACCGAC TTGGATGTGG AATGCCGGGT CGTGTGGGAC
TGGGCCAAAG CAGGGCCAGT CTACGAGACC GGACCAAAGA GCTTTGAGAT CGACATCATC
CTGCACAGCC CCGACCCGAT CGAAGCGCAA CAGGCGCTGA TCGAAGCGGC GAAGAAGGGG
TGTTTTCTGG AGCAGACGCT GGGTCAGGCC AATACGATCC GTCACCGTCT GAAAGTCGGC
GATACGTTCA TTGACGCGTG A
 
Protein sequence
MALTPDQMPD RAEVVFTCNG KAVGKMRNEL DVAMVKPFEE RFALATDEGA FHGGDASAPP 
PLALFIAGLT GCVMTQIRAF AKRLKVTVTD LDVECRVVWD WAKAGPVYET GPKSFEIDII
LHSPDPIEAQ QALIEAAKKG CFLEQTLGQA NTIRHRLKVG DTFIDA