| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2039 |
|---|
| Symbol | |
|---|
| ID | 3934492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2044603 |
|---|
| End bp | 2045520 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904395 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_509981 |
|---|
| Protein GI | 89054530 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.630421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.541544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG GTACGATCCA CTTTCAGGGC CGGGACAGGT TGGTGGCCCG CCTGGACGAT
GACCAGGTTC TCGACCTGCT GGAGGCCTCA GGCGGCGACG TCCATTTCGT CAACACGGTC
GCGATGATTG AAGCGGGACC CGCCGCATTG GACAAAGCGC GTGCGGTGCT GGAGGATCCC
CCGACGCGCG CAGTGATCGC CCTGTCGCAG GCCGAGCACC GCGTGCCGCT GCGCCCCGTG
CAGTATCGCG ATTGCCTTGT GTTTGAGCAG CATCTGATCA ACGGGTTCAA GCAGGCCGAG
AAGATGACGG GGCGCCCCTT CGCCATTCCG CCGGTCTGGT ACGAGCAGCC GATCTACTAC
AAGGGCAATC GGATGTCCTT CATTGGCCAC GGCCAGACGG TGCGATGGCC CGCCTACTCA
GACTATCTGG ATCTGGAGCT GGAACTGGCG ATCATCATCG GGAAGGAGGG CGCTGATATC
CCGCGCGAGA CGGCCCATGA GCATATCTGG GGCTATACCA TCCTTAATGA TGTTTCCGCC
CGGGATGCGC AGATGCGGGA GATGGCGGGA CAGCTGGGGC CTGCAAAGGG CAAGGATTTT
GATACAGGCA ATATCCTCGG GCCTTGGATC GTGACCGCCG ATGAAGTGTC GCATCCGGCC
GTTTTGAACA TGGATGTGAG CGTGAACGGT GAGCGGTGGG GTGGTGGCAC GTCCGCCGAT
ATGCAGTTCG ATTTCGCGCA GATCATCGCA CATATCTCCG CGTCTGAGCG GCTATTTCCC
GGTGAAGTGA TCGGCTCCGG CACGGTCGGC ACTGGCTGTG GGCTGGAGAT CGGCAAGCGG
CTCAGCGACG GCGATATGAT GGATTTGACG ATTGAGAAGA TCGGAACCCT GACCAACACA
ATCAAGAAAG GGGCCTGA
|
|---|
| Protein sequence | MKIGTIHFQG RDRLVARLDD DQVLDLLEAS GGDVHFVNTV AMIEAGPAAL DKARAVLEDP
PTRAVIALSQ AEHRVPLRPV QYRDCLVFEQ HLINGFKQAE KMTGRPFAIP PVWYEQPIYY
KGNRMSFIGH GQTVRWPAYS DYLDLELELA IIIGKEGADI PRETAHEHIW GYTILNDVSA
RDAQMREMAG QLGPAKGKDF DTGNILGPWI VTADEVSHPA VLNMDVSVNG ERWGGGTSAD
MQFDFAQIIA HISASERLFP GEVIGSGTVG TGCGLEIGKR LSDGDMMDLT IEKIGTLTNT
IKKGA
|
|---|
| |