| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2037 |
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| Symbol | |
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| ID | 3934490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2042505 |
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| End bp | 2043812 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904393 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_509979 |
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| Protein GI | 89054528 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.617439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.388769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGT TTGATATCGG CCTAATCGTT CTGGCCGCGA TGCTGGTCCT TGTTTTGCTG
GGGATGACCG TCTCCATCGC GCTGATGGCG TGCTCGTTCG TGGGCGTCTG GCTGATCCGG
GGATCGCCGG ACCTGGCGGC AAACCTTATG GCGCTGGCGG CGTCCGACAC GATCTCCAGC
TACTTCTTTG GCGTGGTGCC ATTGTTCGTG CTGATGGGAT TCCTCGTCTC GGAATCCGGC
ATGGGGCGCG ACGCGTTTGA TGTGGCCAAC CAGATGTTCC GGCGCATTCG AGGCGGTCTC
GGCGTCGGCA CCGTGGGGGC CAACGCGATC TTTGCCGCGA TCACGGGCGT GTCTATCGCG
TCAGCCGCCG TCTTCACGAA GATCGCCGTG CCACAGATGA TGCGCAACGG CTATTCTCCG
CGCTTTGCCA CGGGCGTTGT GGCAGGGTCA TCGGTGCTCG GGATGCTGAT CCCGCCGTCG
CTGCTGCTGA TCCTCTACGG TATCCTGACA GAGCAAAACA TCGGCGATTT GTTTATCGCG
GGCATCGGGC CGGGCATCCT GCTGGCGCTG GCATTCGGCA TCGGCATCGT CGTGACAGCC
ATCTTCGCGC CGCGGACGTT GGGCAACCCC CAGATCCCGG AGGAGGGCGA AATCTCCCGC
GCGAATCTGC TCAGGAAGGG CCTGCCGATT GTGGCCCTGA TCGTGCTGGT TCTGGGCGGG
ATCTATGGCG GCATCTTCAC GCCCGTGGAG GCGGGTGGCA TCGGCGCGCT TGGCGCACTG
GCGTTGGGCA TCATGAAGCG CACGCTCGGC TTGCGTGCAT TGGGCCGGGT GCTGGTCGAC
ACGGGGCTGG TGACGGCGGC GATCTGTTTT CTGATCATCG CCGCCCAGAT GTATTCGCGG
ATGCTGGCGC TGTCAGGTCT TCCGGCAGGC TTTGGGGCCT TCGTGATTGA CGCAGAGCTG
GGTCTGACAA TGGTCCTGCT CCTTTACATC CTTGTCGTCA TTGCCATGGG CATGATGCTC
GACAGCTCAT CCATCATGCT GATCCTGGTG CCGTTGATGA TGCCTGTCAT GGTGGGGTTT
GACGTCGATC TGATCTGGTT CGGGATCGTC ACGGTCATCG CCGTGGAAAT CGGACTGCTG
ACCCCGCCGT TCGGGATATC AGTCTACGTC ATCAAATCCA CACTGGATGA TCCCTTCATC
ACCCTTGGCG ACATCTTCAT CGGTGCGGCC CCCTTCGCGC TGGCCATGCT GGCGGTGTTG
ATGCTGGTCG TCGCCTTCCC GGTCATAGCC ACCGGATTAA TCCCCTGA
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| Protein sequence | MTPFDIGLIV LAAMLVLVLL GMTVSIALMA CSFVGVWLIR GSPDLAANLM ALAASDTISS
YFFGVVPLFV LMGFLVSESG MGRDAFDVAN QMFRRIRGGL GVGTVGANAI FAAITGVSIA
SAAVFTKIAV PQMMRNGYSP RFATGVVAGS SVLGMLIPPS LLLILYGILT EQNIGDLFIA
GIGPGILLAL AFGIGIVVTA IFAPRTLGNP QIPEEGEISR ANLLRKGLPI VALIVLVLGG
IYGGIFTPVE AGGIGALGAL ALGIMKRTLG LRALGRVLVD TGLVTAAICF LIIAAQMYSR
MLALSGLPAG FGAFVIDAEL GLTMVLLLYI LVVIAMGMML DSSSIMLILV PLMMPVMVGF
DVDLIWFGIV TVIAVEIGLL TPPFGISVYV IKSTLDDPFI TLGDIFIGAA PFALAMLAVL
MLVVAFPVIA TGLIP
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