| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2034 |
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| Symbol | |
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| ID | 3934487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2040215 |
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| End bp | 2040865 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904390 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_509976 |
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| Protein GI | 89054525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.480509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0875613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC ACCCAGCAGC TACTTCGCGC CTTAATGCGC GGGACGGAAT TCTGGATGCA
GCGGAGCGTG CGTTCTCGGA GCGCGGGTTT GCCGGGGCGA GTATGAAGTC CATTGCGCAG
CAGGCCTCTG TAGCGCAGGG GCTGATCCAT TATCATTTCA CCTCCAAAGA CGATCTCTAC
GTCGCTGTGA TTGAGCGGCG CGCGGTCTGG ATCACGGAGG CCCGCGAAGA GCTGCTAGGC
GCGGTCGACC TGTCCCATCC CGACGCGGTC ACCGCCATTT TTGAAGCGTT TTTCCGCCCT
CCGTTGGGAC CGGAAGGCGG TGGCCGGGTG TTTGCGCGCA TCTTCGCGTT GCTCGCCGTG
GGCGATGCCA GGGATCAGGA ATTGGTCAAG CGGCTCTACG ACCCATCAGC GCTGAAGTTC
GTGGAGGCGT TGAGCCGCGC GGGGCAGGGG GCGTCGCGGG AGGATGCGTC CTGGGGCTAC
TCCATGGCGC TTGGATTGCT TGTCGGCTCC GTGGGCCGCA ATGGCAGGGC GGAGCGGTTG
GCGGGATCAC CCCAACCGCC CTCGGAGGAT GCAGAGGATC TGATCACACG GCTGAGCGTC
CACGCCACTG GCGGGTTCCG CGCGCTGTGC GCCATGACGG ACGACGAATA A
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| Protein sequence | MTSHPAATSR LNARDGILDA AERAFSERGF AGASMKSIAQ QASVAQGLIH YHFTSKDDLY
VAVIERRAVW ITEAREELLG AVDLSHPDAV TAIFEAFFRP PLGPEGGGRV FARIFALLAV
GDARDQELVK RLYDPSALKF VEALSRAGQG ASREDASWGY SMALGLLVGS VGRNGRAERL
AGSPQPPSED AEDLITRLSV HATGGFRALC AMTDDE
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