| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2031 |
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| Symbol | |
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| ID | 3934484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2036403 |
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| End bp | 2038112 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637904387 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_509973 |
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| Protein GI | 89054522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.538954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.171579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGACATC ATTCCAAGAA AAATCAGTCG ACTGGTCCGG TGTCCATCGA CGTCCCGATG
GTCGGTGATC CGGCGCATGT TCTCCGCGGA TTGCTCACAG CCCAAGTCGG GATCGTGTGC
CTGTCAGACT CGGGTGACAT CTCCTTCGTG AGCAGAGAGT TTCTTGCAGC ATTTGGCCAG
CAATCGCTTG ATCCCGGAAC TGTCATTGGG CAGCCCTATC AAGCTGTCTT CGACGCAGCG
TTGGAACCTT ATGACATATC TGAAACACGC AAGACTGCTC TGGCGACCGG ATTGGCCGTA
TCAAAGACAC AACCAGATGT CGCCTGGTCC TCAAACCCTG CGGGCGGCAG CATCGGTATC
CTGACCGGCT CTGCGACCGA GCTGTCGCAA TCTGCGCCCA TGTTTGAACC AGATGAACTG
ACAGGTTTAG GGAACCGAAA GTATCTCAAG GCTTGTTTTG AGGCTATCGC CCAAGAAGAT
AGTGGCGCGA TCGCGCTCTT TCTCGACCTC GATCACTTCA AGCAGGTCAA TGATACGCTC
GGTCATGCCA TTGGAGACAA ACTGCTTTGC AAAGTTGCGG ACCGGCTCCG AAAATCCGTG
CGGGAAGGCG ACATAGTTGT GCGGATCGGC GGGGATGAGT TCGCGATTTT GCTGATTAAT
TGGGATCAGT CCGCGGCCGA AGACGTAGCG GCACGCATTA TCAAGGTGAT CGGCAGGCCA
TTTCTAATTG AAGGCCATCA AGTCACAATA GGCGTAAGCA TCGGAATGGC CGTCCGGCTA
CCGAACGAGC GGGAATCCGA GAAGTTGCTG CAACGGGCAG ACGTCGCCTT GTATGAAAGC
AAGCGTCTTG GCCGCAATCG CTTTCACTGG TTCAAAGATG CGATGTTGAT CGAGTTGCAA
CAGCGGCGCG ACACAGAGAT CGATCTTCGT AAGGCCGTCT TATTGGGCCA ATTTGGTGTT
GTTTTCCAAC CGCAGATGAA CTTTCAAGAC CAAGACATCA CTGGCTTTGA GGCCCTTGTC
CGGTGGAACC ACCCGCTTCG CGGAGTGATC GCGCCGATTG AATTTATTGA AATTGCGGAA
GAAACTGGCC TAATTGTGGA AATTGGGACC TGGGTGCTGG CCGAGGCATG TCAGGCTGCC
GCCGGATGGC CAGAGGACAT CGCGGTCGCC GTCAATATTT CGCCCGTACA ATTTGAAGAT
GAGGGCTTTA TGGTGTCCGT TCAGACGGCT CTACAGAAAT CGAAACTTCA GCCGCATCGA
TTGGAACTGG AGATCACCGA AGCAACGCTC CTCTCAAACG AAGAAGCTGT TTTGGCGCGT
ATGAATGAAC TCCAAGGGCT TGGCATCAAG ATATCTCTAG ATGACTTTGG CATCGGCTAC
TCGTCTTTGA ATTACCTGCG CAAGTACCCA TTCGACAAGG TGAAAATCGA CCAATCCTTT
GTGCGCGAAC CCTTTGCGGA CGAGAGTTCC CATCAGATTG TGGAGGCCGT TGCACATCTT
GGCTCAGCTC TAGGCATGAC GGTACTGGCC GAAGGTGTAG AAACGCACGA GCAAATGGAA
CGCATCCGAT CAAAGGGTTG CGCATCTATT CAAGGCTATC TGGTTGGTCG TCCGATCCCG
CTCGACGACA TTACATCTTT TCTCACGTCT TTACCGAACG AGATTGGCGG GAGAAAACCT
TTGCCCGCAA TACAAGGAGA CACGACATGA
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| Protein sequence | MGHHSKKNQS TGPVSIDVPM VGDPAHVLRG LLTAQVGIVC LSDSGDISFV SREFLAAFGQ
QSLDPGTVIG QPYQAVFDAA LEPYDISETR KTALATGLAV SKTQPDVAWS SNPAGGSIGI
LTGSATELSQ SAPMFEPDEL TGLGNRKYLK ACFEAIAQED SGAIALFLDL DHFKQVNDTL
GHAIGDKLLC KVADRLRKSV REGDIVVRIG GDEFAILLIN WDQSAAEDVA ARIIKVIGRP
FLIEGHQVTI GVSIGMAVRL PNERESEKLL QRADVALYES KRLGRNRFHW FKDAMLIELQ
QRRDTEIDLR KAVLLGQFGV VFQPQMNFQD QDITGFEALV RWNHPLRGVI APIEFIEIAE
ETGLIVEIGT WVLAEACQAA AGWPEDIAVA VNISPVQFED EGFMVSVQTA LQKSKLQPHR
LELEITEATL LSNEEAVLAR MNELQGLGIK ISLDDFGIGY SSLNYLRKYP FDKVKIDQSF
VREPFADESS HQIVEAVAHL GSALGMTVLA EGVETHEQME RIRSKGCASI QGYLVGRPIP
LDDITSFLTS LPNEIGGRKP LPAIQGDTT
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