Gene Jann_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2026 
Symbol 
ID3934479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2031829 
End bp2032293 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID637904382 
Productinvasion associated locus B 
Protein accessionYP_509968 
Protein GI89054517 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.201863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTGCC TTCTGGCGCT GGTCCTCTGT CACATTGCCC CTGCCGCCGC GCAATCGCCG 
GACCAGTCCA CCGTGTTCGG CGATTGGGAG CGGGTTTGCT CCACCGATGG GGCCTGCGTG
TTCTCGCAGG CCAACGCCGA TGCAGACACC AACGACATCC GCATGCGCAC CGAGATTTCC
CGGGTGTCGG ACACGCAGAT CCTGATGTCG GTCGTGGTGC CCGACAGCGT GCTGCTGACC
GAGGGGCCGT GGTTGACCAT CGATGGCATC TACGTGGGTG AGTTGAACTA CGTCCAATGC
CCCGGCGGAT GCCTGGCCCG CATCCTGTTC ACCGACCAGC AGTTCCGGCT TGTGTCCGGC
GGCACGCGCG GCGTCATCAC GGTGACGGCT GGCGGCCAAC GCGTGGGGCT TGTCGTCTCC
ATGGACGGGC TGCAGGACGG CCTCGCGTCG CTCGACGATC TGTGA
 
Protein sequence
MPCLLALVLC HIAPAAAQSP DQSTVFGDWE RVCSTDGACV FSQANADADT NDIRMRTEIS 
RVSDTQILMS VVVPDSVLLT EGPWLTIDGI YVGELNYVQC PGGCLARILF TDQQFRLVSG
GTRGVITVTA GGQRVGLVVS MDGLQDGLAS LDDL