| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2025 |
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| Symbol | |
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| ID | 3934478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2031039 |
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| End bp | 2031818 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904381 |
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| Product | hemagluttinin motif-containing protein |
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| Protein accession | YP_509967 |
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| Protein GI | 89054516 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.219525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC TCTCGATCAC CCTGTCACTG AGCCTGTCGC TTTCGGCGAT GTCCGGAACG
CTGGTTCTCG CCGATCAGGT CATCAACGAT GATCTTATTG TCACGCAAAG CGCCTGTGTC
GGTCCCAATT GCTTTGACGG GATGGATTTC GGGTTCAGCA CCCTCATCCT CGACGGGCCC
AACCCCTCGA TCCTGTTTGA AGACAGCAGC TTGTCCGCCT CCTTCCCGAC CACGGACTGG
CGGGTGGGGG TCGACAATGC CACCAACACC TTCGCCATCA GCAATGCGGA TACCGGGCAG
TCTGTCTTCT CCGTGAACGC CGCCGGGGAT GCCATCGCCA TCGGTGCCGG TGCGACGCTG
ACGGCGGGCA CCGTCAATGT CGGGGGCCTG CGGATCTCCA ACGTGGCCGA TGGGGTTCAG
GCCACAGACG CCGTCACCCT CGGGCAGTTG AATGCGGCGG TGTCGGCGCT GCCCACGGAT
TTCGCGGCGA TCCAGACCGC GAACGCCGGC AACATCGCGC GCCTCAATGA GCTGTCCGAG
GAGATCAATG CCGTAGGTGC CATCGGCTCG GCCATGTCGG CCCTTCAACT CAACCCCCGT
GGCACCGGCG ATCATTTCTT CTCCATCGGG CTCGGCAACT ATGAGGGCAC GACCGCGCTG
GCGATCGGCA GCTTCCACTT CCTTGCCGAT GACCGGGTCT TTGTGAACAC CGGCGTGTCG
GCGGCCACCA ATGGCGTGGG TGGCACGGCG GCGCGGTTGG GCGTGACCTT TGGTCAGTAG
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| Protein sequence | MKKLSITLSL SLSLSAMSGT LVLADQVIND DLIVTQSACV GPNCFDGMDF GFSTLILDGP
NPSILFEDSS LSASFPTTDW RVGVDNATNT FAISNADTGQ SVFSVNAAGD AIAIGAGATL
TAGTVNVGGL RISNVADGVQ ATDAVTLGQL NAAVSALPTD FAAIQTANAG NIARLNELSE
EINAVGAIGS AMSALQLNPR GTGDHFFSIG LGNYEGTTAL AIGSFHFLAD DRVFVNTGVS
AATNGVGGTA ARLGVTFGQ
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