Gene Jann_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2019 
Symbol 
ID3934472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2023013 
End bp2023543 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID637904375 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_509961 
Protein GI89054510 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.92062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0694487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGGG CGACTGAGCA GCCAGCCTAT ATAGCGCCGG CCGGAACCAC CATTGGCCAC 
GTGCATTTGC GCGTGGCCGA CCTTAATCGC GCGATTACGT TCTATTGTGG CGTGCTCGGG
TTTCAGGTGC AGGCGCGTAT TGGGGATGAT GCGGCGTTTC TGGGCGCGCC CATGGCGGGC
GAGGACGGCA CGATCTACCA CCATCATATC GGCCTGAATA CATGGACCAG CCGCGGCGGC
AAACCACCCG CTCCGGGGCA TACGGGACTC TATCACGCCG CCATTCTCTA TCCGTCCCGC
GCCGATCTCG CAGGGGCTGT GCGCCGGGTT GTCGAAGCAG GTATTCCGCT GTCGGGCGCA
ACCGATCACG GGATTTCCGA GGCGGTCTAT CTGGATGACC CTGACGGCAA TGGCATCGAG
CTCTACCACG ACCGTGTGCC GGAAGACTGG CCGCGTGATG CAAGGGGAGC GCTGAAGATG
GCGCGCCGCC CGCTCGATGT GAACGCGCTC CTGAGTGATG CGGCAACCTA G
 
Protein sequence
MTWATEQPAY IAPAGTTIGH VHLRVADLNR AITFYCGVLG FQVQARIGDD AAFLGAPMAG 
EDGTIYHHHI GLNTWTSRGG KPPAPGHTGL YHAAILYPSR ADLAGAVRRV VEAGIPLSGA
TDHGISEAVY LDDPDGNGIE LYHDRVPEDW PRDARGALKM ARRPLDVNAL LSDAAT