Gene Jann_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2016 
Symbol 
ID3934469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2021779 
End bp2022078 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content60% 
IMG OID637904372 
Producthypothetical protein 
Protein accessionYP_509958 
Protein GI89054507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.18491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC TTCGCCGCGC CGCCGTGTTT GAAGGATGGA CGTTGATCGT GCTCTTTGGT 
GTTGCCATGC CCCTGAAATA TGGGGCGGGC GTCGAACAGG CGACGTCCGT GATGGGACCG
ATCCATGGTC TCGCGTTCAT GGTGTTCCTG TGGTTCGTGA CCCGGTCTTG GGCGGAAGGC
ATCATCAACG GCTTCGGAAC CGTCCGGCTG GTCCTTGGGG CATTTGTACC GGGCGCAGGC
TTCATCAATG AACGTTGGCT GCGTCGTCAG TCAGAAGAGG AGGGGCGCGA TGCTCTATGA
 
Protein sequence
MIGLRRAAVF EGWTLIVLFG VAMPLKYGAG VEQATSVMGP IHGLAFMVFL WFVTRSWAEG 
IINGFGTVRL VLGAFVPGAG FINERWLRRQ SEEEGRDAL