| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2010 |
|---|
| Symbol | |
|---|
| ID | 3934463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2017050 |
|---|
| End bp | 2017706 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637904366 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509952 |
|---|
| Protein GI | 89054501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.29773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.301205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAT CGCTTTCCGG GTTTGACCCG ATCCCGCAGC ATAGGGGCCT GTGGTCTGCT
CAAAAGGGCA CATTGCGATG CACCGCTTTG CAGCTGCGCG ACGGCTCACT CTGCCTCTAC
AGTCCGGTTC TGGGCTTGGG GGATGCAGCC CGAACGAGCC TCGCAAAGCT TGGCAAAGTC
GCATTCCTGC TCGCACCAAA TCACTATCAC AACAAAGGCC TTTCGGAATA CGCAAAGGCC
TTTGCGGGTG CCGCGCTCGT GTGTTCCGAA CGGGCGCGGC CACGCCTTGA GCAACAGACT
GGCCTGTCAT TTGAAGGGCT GCAACCGCTG AACGACCTGC TGCCGGATGG TGCAAAGATC
CTTGAGCCAC AGGGGCTGAA GACAGGCGAA GTCTGGTTAA CGCGTGTGAC AAGTGAAGAC
ACGGTTTGGG TTGTATGTGA TGCCTTCAAG GGGCCTTCGG GAAAAGAGGG TGACATTAGT
ACGCAGATTG AACTGTTGGG CACCTTCCCG ACCTACGGAA TTGAGGACAA AGGGACATAT
TCGGCGTTTG TCAAATCCAC GTTGACCGAC CTACCGCCAA CAACAATAGT CCCGTGTCAC
GGTTCGATTG TCCGCAGTGA CCACCTGGCT GCGGATATTG CGTCGTTGAC AGGTTGA
|
|---|
| Protein sequence | MNRSLSGFDP IPQHRGLWSA QKGTLRCTAL QLRDGSLCLY SPVLGLGDAA RTSLAKLGKV
AFLLAPNHYH NKGLSEYAKA FAGAALVCSE RARPRLEQQT GLSFEGLQPL NDLLPDGAKI
LEPQGLKTGE VWLTRVTSED TVWVVCDAFK GPSGKEGDIS TQIELLGTFP TYGIEDKGTY
SAFVKSTLTD LPPTTIVPCH GSIVRSDHLA ADIASLTG
|
|---|
| |