| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2009 |
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| Symbol | |
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| ID | 3934462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2015625 |
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| End bp | 2016881 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637904365 |
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| Product | major facilitator transporter |
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| Protein accession | YP_509951 |
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| Protein GI | 89054500 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0610699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.51216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT TTGTATGTTC GAGGTTTCGC GAGCACTGTT GCCCTATGCT ACCGGTCGCG
TTGAAATCCA AAGAACTACG AAAGCTGTTT CTGGCTCAAT TACCAGCCGA TTTCGCAGAT
TGGTTGGACT TCGCGGCCAT CGGCACGCTT CTGGCGTTCG TCTGGGATGC ACCCAGCTAC
GCTTACGCTT TTCTTGCCGT CGGCATGGGC GCGCCGTATC TGCTCGTAGG CCCATTTGCT
GGCGTGCTTG TTGATCGGTT GCCCATCCGC CGCGTTCTGT TCTGGAGCAA CTTTGGACGC
GCGCTCGCCA CAGGCGCACT TTTCTTTGCC GACAACTGGG GCGTGTTGAT TTGCCTTGTT
GCAGTCCGTG CATCCGTGGA CAGCTTCTTT ACCCCAGCAA AGCAAGCGGC CATTCAGGCT
TTGACCACGG AAGGCGACCG CGCGTCCGCC AATGGTTTGA GCCACGGTAC CAATCAGGCG
TCAAAGATCG TCGCCCCCGG TGCTGGAGGG ACCTTTCTGA TTTGGTTTGC ACCTGCTCCA
ATCTTTATCG TCAACGCGAT GATCTCTGTC TCGGCGGCGG TACTGTGCCT CCGGCTGCAA
GATATCGAAA GGAATGAAAA CCAACGGAAA TCTGAAGGGA CAGGGCTTTG GAGCGAAGTC
AAGGAGGGGC TCGCTTACGT GCGATCGCAG GTCGTTGTCA GGACCGTTTT GCTCATGATG
GCAGCCATGT ATTTCGCGAT GTTCATCTAT GACACCTTCA TAGCGCCCCT CGCACGCGGT
CTTGATTTTG AACAACAGCA TTTGGGGTAC GCGCTGGCAG CTGTTGGGGC TGGCGGGGTG
TTCGGTGCAA TTGTGTTCTC GTTCCTGGCG GAACTCAAAA AACCGCAAAG GTGGATCGCG
GTCGGAACGT TTGTCGGGGG CGCCATGCTC CTGACGCTCG GAATCTTTGA TCTCCTGAGC
GCATCCATGC CCCTTCAGGT TTTCATACTT CTCTTCCTAG TTTTGGGACT GACGTCAGCC
ATGGCCGTGA TCCCAGTGCG CATCATCTTG CAAAACACTG TTTCGCCCGA CCGGATGGGG
TCGGTAACGG CACTGAGCGA AGCCGCAAAT ACTTTGGCGC TGCTGACCGC ACCATTTGTG
GGCGCATTGC TGGTCAGTCT CTTTTCCGTT GGAGCGCCTT TCACAGTCGG CGGTTCCATT
CTTCTAGTTG CGGCTGTAGT GATTTCGCGC CTCGAGCTTG ATCAGTCCAA AAGCTGA
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| Protein sequence | MSAFVCSRFR EHCCPMLPVA LKSKELRKLF LAQLPADFAD WLDFAAIGTL LAFVWDAPSY
AYAFLAVGMG APYLLVGPFA GVLVDRLPIR RVLFWSNFGR ALATGALFFA DNWGVLICLV
AVRASVDSFF TPAKQAAIQA LTTEGDRASA NGLSHGTNQA SKIVAPGAGG TFLIWFAPAP
IFIVNAMISV SAAVLCLRLQ DIERNENQRK SEGTGLWSEV KEGLAYVRSQ VVVRTVLLMM
AAMYFAMFIY DTFIAPLARG LDFEQQHLGY ALAAVGAGGV FGAIVFSFLA ELKKPQRWIA
VGTFVGGAML LTLGIFDLLS ASMPLQVFIL LFLVLGLTSA MAVIPVRIIL QNTVSPDRMG
SVTALSEAAN TLALLTAPFV GALLVSLFSV GAPFTVGGSI LLVAAVVISR LELDQSKS
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