| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2006 |
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| Symbol | |
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| ID | 3934459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2012478 |
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| End bp | 2013473 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637904362 |
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| Product | transposase IS116/IS110/IS902 |
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| Protein accession | YP_509948 |
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| Protein GI | 89054497 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.443757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA GTAAGATTGA CGAGTTGATG TCGGTTGGCA TCGATATTGG CAAAGACACA
TTCCATGTCG TGGCATTTGA CCCTGATGGG CACCTGGTGA TGCGCAAGCG GATCAAGCGG
TTGGCTCTTG TGGCGACCTT CGAGAAGTTG CCGCGTTGTG TGGTGGGTAT GGAGGCGTGC
CTGAGCGCCC ATTTCGTGAG CCGGACGCTT CGCAAGATGG GCTTCGAGCC TGGGATCATT
CCAGCGATCT ACGTGAAGCC GTTCATCAAG GGTCAGAAGA ACGATTACAA TTACGCCGAG
GCTATATCTG AGGCAGCGTT ACGCCCTAAT CTGCCAGTCG TTCCAGAGAA AAGCCAAGAG
CAGCTCGACC TGCAGGCGCT ACATCGCGTT CGCTCGCGCC TTGTGTCGCG CCGAACTGCG
TCGATAAATC AGATCCGCGC TTTCTTGATC GAGCAAGGCA TCACGGTGCG CAAAGGTCTG
CGCGTCTTGA AGAATTCCTT CGGAAAGATC TTGGATGAGC GCAAGGACGA GATATCACCG
CGCATGCGCA CGATCTTGAT CGGCCTGTAT GGAGATTGGC TTTGGTTAGA TGATCGGATT
GATACGGTTT CCAAAGAGAT CGAGCAGATC AGTCGAACAG AGGAGAACTG CATCAATGTC
ATGACGGTGC CTGGCATTGG CCCAATGATC TCAACCGCGA TGGTCGCCGC CATCGGGACA
GGCGAAGCTT TCGGGCGAGG ACGCGACTTT GCGGCCTGGG TGGGATTGGT GCCCAGGCAA
TACAGCACCG GAGGACGAAC GATCCTCGGA CGCATCACCA AACGTGGCAG TCGATATTTG
CGAATGCTCT TTGTCCAAGC TGCCAAGGTT ATCTTGATGC GGACCAATCG ATGGCCGGAC
TTCAGCTTTG GCGATTGGTT GATCAAGGCC GCAGAGCGGA TGAACCGAAA CAAGCTCGCC
GTTGCCTTGG CCAACAAATT GGCGCGCATG GCCTAG
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| Protein sequence | MAKSKIDELM SVGIDIGKDT FHVVAFDPDG HLVMRKRIKR LALVATFEKL PRCVVGMEAC
LSAHFVSRTL RKMGFEPGII PAIYVKPFIK GQKNDYNYAE AISEAALRPN LPVVPEKSQE
QLDLQALHRV RSRLVSRRTA SINQIRAFLI EQGITVRKGL RVLKNSFGKI LDERKDEISP
RMRTILIGLY GDWLWLDDRI DTVSKEIEQI SRTEENCINV MTVPGIGPMI STAMVAAIGT
GEAFGRGRDF AAWVGLVPRQ YSTGGRTILG RITKRGSRYL RMLFVQAAKV ILMRTNRWPD
FSFGDWLIKA AERMNRNKLA VALANKLARM A
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