Gene Jann_2004 details

Gene Information

• Locus tag: Jann_2004
• ID: 3934457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 2007963
• End bp: 2011463
• Gene Length: 3501 bp
• Protein Length: 1166 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637904360
• Product: hypothetical protein
• Protein accession: YP_509946
• Protein GI: 89054495

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.731586
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATAAAC CGTCAGTAGA GAGCTCTATT GTCCGAATTA TTCGCATCAG TGACCAGCAG 
TGGGTAGGCT GCGGATTCTA TGCGAAATTT GGCGACCTGA GCGTGCCGCC CCTAGTTGTT 
ACTTGCGCAC ACGTAGTTGC CGATGCGATC GGTGACCCTT CTGTTGCAGA GCAAGCCAGT 
AGACCAAGCG GAACTTTTAG AATTGACTTC CCCAATTCGC TGCAAAACCG TCAGATTGAA 
TGCAATGTGG TCGACGCGAA AAACGCTTGG CATCCCGCTA CTTCCACCCT GTCGGATCAT 
TCTAGACCAT TTGATATCGC CTTCCTTCAA CCACCTAGTC TAGAAATCCC AATCGATATA 
AAGCCCATAG ACATCAAAGT CGATTGCACA TTTACCTCGG GACAGAACTT GAATGCGTTT 
GGTGGTGCCG AAGAAGGCAA CTTAGTCGAC GACGAGTTCG GAGAATGGGT GCGCGGTAAA 
CAAGTCCGGC GAATGCACGG ACGTTTTCAG TTTAAGTCCA ATCCAAGTGA GACACTAAAC 
GTCGTTAGAG AAGGCTTCTC TGGCACTCCA ATCATCACAG AAAAAAATGA TGACGTCATT 
GGAATGGTAA CTGTTGCGGA CGAAGGCAAG GGCTTAGCAT GGTTTCTTCC AGTTCAGACG 
CTCTTCGAAG CCATTAACGG CGGTCCCGTC GAAGAACCAG AGGAGATAAC CGTTGATCCT 
CGCACCTTTT CCCTTGATGA CGTTCCTATC GATCTGCACC CACCTTTCGT AGAGACCTAC 
TTCAAAAGAA AATCTGTTCA AGAAACGATC GAGGCCAAAT TCGATAATTT TCTATCGATA 
GGAATTTACG GCGGTACAGA TTCCGGCAAG ACTGGCGAAA CATCCATTTT CGTGCAGCGT 
TTGGTGGAAT CTGAGCAACG CCCATGCGTT TGGTTCGTTT GTTCTGAAAC TAGTTCGATT 
ACAGAACTTA TTGAAGTTGT ATCTGAAGTT CTGGGCGAAC ACTGCGGCGA GAAGCCGACC 
TTTAGGCACT TGCTCCGCGC GCTGCACCAA ACGAACTTGT TGTTGATAGT TGACCAGATC 
AACGCGGTTT CTGAAAGGAA CCGACAAGGC TTCTTTGGTC TTCTCGATCT GTGCAGGAAT 
AGAAAAAGCA CCACTTCTCT TATTTTCATC CTCTCAGATG ACCACTCTGC TTACAAGGAT 
GACGCTTCCA CAGTTTGTCT GAGTGCAATG TCACGAGAAG AAGTGGTCGA GATCATTTCA 
CAAGAGGCCG GTCTCCCAGT GGAGGACGTT CAAGATGCTC TTTATGCCGA CAGATACCGT 
TGTTCGGAGG TCTCGCTTCT TCTTCAAAGA ATCGTTGAAG ACCCCAGCAG GATTCACGAA 
ATCGCTAAAG AGAATGTTGC GCTTAACGAC ACTATCTCAT CAGAATTCAA ACCACACGAG 
CGCGCTGTAC TTACTGCATT GGCAATGACT GATCAGTATG TCGACAATGA CTTTTTCCGA 
AGAGTCTGCG AAACGATAGG TGTACAAGAT TGGCAAGACC TTCAAGACCG GTTGTTCGGC 
TTCGGACTGC TTCGCACTGC GGGCACGCGT AGGATTTTTG TAACCAATTT TGTCCGGGAA 
AGAATTCGTT CTTCAACTCC CACGGTGAGT CAAAAACAAG CCGATAAGAT TCTTGGTACG 
GTTTGGTTGG AGAAACACAA AGAACAAGAT CAAGGCGAAA CGCCCAAATT CGACATTTCT 
AGCGACGACA TGATCTACTT GGCAATTCGT CACTTTCAGC GCAGCATGAG CGCGGAGCAG 
ATGGTGGAAT CGCTAATAAG CGAGCACCGT TGGAATTTGG CTAGAGCTGG CCACCATCGA 
TATCTCGTTG CGATCCTTGA TTTCGAGTTC AAGACAAAGC GGCGAATGCC AATATGGTCC 
CAGTATCAGT ACGTTCAAAG CCTTGTCGCA ACAGGCGAAA TAACTTCTGC TTTCTCAGCC 
ATGAAGCGAA TTTGTTCGAT TTTGCTTACA AGTCGCAATC TGAAGCCAGA CTCGCTGATG 
CAGTTATGCA CAAGATTTTC TGACGTTCTT CAGAACGCTC GGCACTACGA TTTGGCTCAA 
GAACTACTGG AAACTGCACT ACAGGAAATC GACAACTCCC AGCTGCAAGC TTCAACGCTT 
CGGATCGCAA CATCCCATCT CTTATGGAGT AAGATATATT GTGAGCCTAA AATTGGAATT 
GCGTACGAAC TGATATCATT GCGCGAAGAA GCACTGCTGG CGCGAAATGA TCTCGCGGTT 
GCGATTGAGT CCACAAGACT GGGTGTTCTT TACCTAAATC TAAAAATGGC TGATAAGGCT 
GCTACCGAAC TCCTGCAGGC CGTAAGGTTC TTCCAACATA CAGACCAGCG AGGCCTTATT 
TGGTCACTTG GCCACTATTC AGTGGCTCTA GTGCGAAGTG ATCCACTGAA CGTACCCCTT 
GATGAGTTAG AATGGCTTTG TGAATGCATA CAGAAATTCG ATCTTCTTAG CGAAGAGACT 
TACGAGTATT TTCGTCTGTT TGAGGAGCTA CTTCACGGTG AAGAGCTTCA AGAACGAGTT 
GCCTCCGTAA AAGAAACCGC TCTAGAAGCT TCGAACAACA GAGAACTGAG AGAAGAAGAT 
TTAGAATTCG TTTTGGTCTT GCAAGAGTTT CTGAAAGAGA ATGGCTTGGA CGAACAATCG 
AAGAAACGAC AAGGCACGGC TGATACAGAT AACGTGCGAG GCAAAACTTC GTTTCTTCAC 
TCGGCTCAAT TCAAAATGGA TTCGCAAGCA AATAAGTCGT TTGTAAGGAA CCTTGTAAGT 
CGTGATCCGG AGGGTGTCGC TTCAGATCTG TTCGATCGCT ACTCCCTCCA ACGCATCTTT 
CGCACACCAA TCCTATCTAG TGTGTTGGTC GCCTGCTGCA AAAGGTCTCG CAACGAAGAG 
CTAGTCGACT CCTACGTCGT ATCCAACTTA GGCGTGATAT TGTCGTCCAG AGACGACGTT 
AAACTCTTCT TTGCGAGGTT CTTGGAGCAG GTAAAGAAAG ATGCGGAATG CGAAGAATTG 
CTCGACTCAG TTGGAAAAAA GTCAGGCTTC AACTTCTATA ACGTTTCTGC AAACCTGTAC 
TCCAGAAAGA GTTTTGAAAC TGCGCTCGAC TACAACCAAA AAGCACTCAC AGCATCCGCA 
AAAGCCTCTC AAAGGGCGAG AGTCAATAAT AACATAGCGG TCTTGATACT TGAGAATGGC 
AAATCGGACT TACTTGCAAA GGCTAAGCTC CATATTCAAG AATCCCTCAA AGAGAAATAC 
CGTGGATACA ATTGGCCCAA TCGAACCAAA CTTGCAATTG ATGTAAATTG TGCCGAAAGC 
CAAGAGCTTA ACCAAATAGT GGCGGGTTAT TTCGAACGGT CCGGCGACGA CCAAAGGACT 
GTAAAATACA CTTCGCGCCT AATCATTGAT CCTGACCGGC GTATTGAGTT TCTCTCAGCC 
TGCGACGCAA TCCTAGACTA G 

 

Protein sequence

MHKPSVESSI VRIIRISDQQ WVGCGFYAKF GDLSVPPLVV TCAHVVADAI GDPSVAEQAS 
RPSGTFRIDF PNSLQNRQIE CNVVDAKNAW HPATSTLSDH SRPFDIAFLQ PPSLEIPIDI 
KPIDIKVDCT FTSGQNLNAF GGAEEGNLVD DEFGEWVRGK QVRRMHGRFQ FKSNPSETLN 
VVREGFSGTP IITEKNDDVI GMVTVADEGK GLAWFLPVQT LFEAINGGPV EEPEEITVDP 
RTFSLDDVPI DLHPPFVETY FKRKSVQETI EAKFDNFLSI GIYGGTDSGK TGETSIFVQR 
LVESEQRPCV WFVCSETSSI TELIEVVSEV LGEHCGEKPT FRHLLRALHQ TNLLLIVDQI 
NAVSERNRQG FFGLLDLCRN RKSTTSLIFI LSDDHSAYKD DASTVCLSAM SREEVVEIIS 
QEAGLPVEDV QDALYADRYR CSEVSLLLQR IVEDPSRIHE IAKENVALND TISSEFKPHE 
RAVLTALAMT DQYVDNDFFR RVCETIGVQD WQDLQDRLFG FGLLRTAGTR RIFVTNFVRE 
RIRSSTPTVS QKQADKILGT VWLEKHKEQD QGETPKFDIS SDDMIYLAIR HFQRSMSAEQ 
MVESLISEHR WNLARAGHHR YLVAILDFEF KTKRRMPIWS QYQYVQSLVA TGEITSAFSA 
MKRICSILLT SRNLKPDSLM QLCTRFSDVL QNARHYDLAQ ELLETALQEI DNSQLQASTL 
RIATSHLLWS KIYCEPKIGI AYELISLREE ALLARNDLAV AIESTRLGVL YLNLKMADKA 
ATELLQAVRF FQHTDQRGLI WSLGHYSVAL VRSDPLNVPL DELEWLCECI QKFDLLSEET 
YEYFRLFEEL LHGEELQERV ASVKETALEA SNNRELREED LEFVLVLQEF LKENGLDEQS 
KKRQGTADTD NVRGKTSFLH SAQFKMDSQA NKSFVRNLVS RDPEGVASDL FDRYSLQRIF 
RTPILSSVLV ACCKRSRNEE LVDSYVVSNL GVILSSRDDV KLFFARFLEQ VKKDAECEEL 
LDSVGKKSGF NFYNVSANLY SRKSFETALD YNQKALTASA KASQRARVNN NIAVLILENG 
KSDLLAKAKL HIQESLKEKY RGYNWPNRTK LAIDVNCAES QELNQIVAGY FERSGDDQRT 
VKYTSRLIID PDRRIEFLSA CDAILD