| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2003 |
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| Symbol | |
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| ID | 3934456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2005022 |
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| End bp | 2007007 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904359 |
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| Product | glycosyl hydrolase, BNR protein |
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| Protein accession | YP_509945 |
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| Protein GI | 89054494 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.075614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.402986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CCGCCGATAT ACATCCCAAG CCAGAACCCG CCACCTCGCC CGCGCCCCCG
GTGTCGCCGC CCGCCGATAT TCCGTTCCCC TTCGCAACAC TCGTCGAGAA CCAGCGCAGC
CGAGCTCACA ATGCCACGCG CCGCGCCCAG GGCATCTTTG CCGCACTAAT CGCCGTTATC
CTACTAGGTA TCGGGTACTA CGTAGGCCTG CCGTTGTACC TCCAATGGAA CGAGTCGTCA
CGCAGCGTCT ACGAAGCTGA GGCGGGTACG CTGTCCTCGC AGTTGGACCG GATGGATGAG
GCAAGGGACC GCATATGGAC AGCTCTGTCC GAAGAGCTGA AGGGAATCGG AACTCCTCGC
CCCTCTGGCG TCGACGTAAA CCTGAATGAC GTCCGTAGTC TGCCCGACGG TACTATCTTG
GTCGCCGTGG GGCGGCACGG CACCGTCATA CGGTCCACCG ATGCCGGCAA CACTTGGACA
CCTCGTCGCT CCGGCGTGGA TATTGATCTA TTCAACCTCC GTGTTCTGCC CGACAGCACC
ACCCTGGTCG CTGTGGGAGA GGGCGGCACC GTCATACGGT CCACTGATGC TGGCAACACT
TGGCAGTCCC GCCCTTCCGG CGTCAATAAC AGTCTGTACG ACTTACGCGT GCTACCCAAC
AGCACCACCC TAATCGCTGT TGGACGAAGC GGTGCAGTCA TACGGTCCAC TGATGCTGGC
AACACTTGGA TGCCCCGCCC CTCCGGCGTG GATGTTGATC TATACAACCT TGGCATTCTG
GCGGACGGCG CCACCTTGGT CGCTGTAGGC GAAGACGGCA CTGTCATACG CTCGACCGAT
GCCGGCGAAA CTTGGACATT CCTTCCCTCC GTCGTGGATG CCGATCTGTT CAACCTCGGC
ATTCTGCCCG ACAGCACCAC CTTAGTCGGG GTAGGAGAGA GCGGCACCGT CATAAGGTCT
ACCGATACCG ATAGCACCTG GATGCCCCGC CCCTCCGGCG TCATTGCGGA TTTGTATGTC
CCTCGCGTGC TGCCCGACGG CGTTACTCTG ATCGCGGTGG GATCAAGTGG CGGAATCATA
CGCTCGACCG ATGCCGGCAT GACATGGACG CCCCGCCCCT CCGGCATCGA TGGGAATCTG
TTCAACTTCA GCGTTTTGCC CGACAGCGGC ATCCTGGTGG CGGTAGGGTC AGATGGCGCA
GTCATACGCT CGACCGATGC CGGCGTGACA TGGACGCCCC GCCCTTCCGG GCAAGATATT
ACCCTAAGAG ATATCCGCGT TCTACCCGAT GGTACGACAC TGATTGCGAT AGGTTTTTTT
GGCGCGATTG TGATTATCGA CGACCGTTAC GCCGATGCCC TCGCCGCGAT CGGACCTCTC
TCCGGCTCCC TCGGCGATAA TGCCTACCGC AGCGGCATTG CCGGGCTCCC GGAGTATGTT
CGCAACCACC CCGTCGTTGG GGCCTTACTC GCCGAACTGG ACGGCACCAT CGAAGGTCGT
GCCGACCTCG AAACCCGCCT TCAATCCGCC CGCGCCTCCG CCGACGAAAT CAGGACAGGC
GGCTTTTCTC TCGCTCAACG GCGCCAGGAT TTCGAGGAGT TCATGCGCGT ATGTACAGCC
GACCTGTCAG ACGAGGCAGA GGGCGTGGGC ACCGAACACT GCACCCGCGC CTATGTCGAC
CTTCGCCAAG CCGAAAGCCA GACGGTGTGG GAGATCCTTG CCGAACGGGC GCCGCAGGCC
ATCTTGCTGT TGTTCCTCCT CGCAACGCTT GCGGCACTTT ATCGGTACAA CATGCGCCTT
GCGGGTTTCC ACGCCGCGCG AGCCGACGCG CTGCATCTCT ACGCCATGGG CCGCACCCAC
GACCCCGCCA TTCTGACGGA GTTCTCGGAC GCACTAGCCG CCGATAAGGT CGAGTTCGGC
AAGGGGAACA CACCGTCGGA GCAGGCTGTC GAGATCGCAA AGGCTATGGT CGGGCGGCGT
GGGTAA
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| Protein sequence | MNQPADIHPK PEPATSPAPP VSPPADIPFP FATLVENQRS RAHNATRRAQ GIFAALIAVI
LLGIGYYVGL PLYLQWNESS RSVYEAEAGT LSSQLDRMDE ARDRIWTALS EELKGIGTPR
PSGVDVNLND VRSLPDGTIL VAVGRHGTVI RSTDAGNTWT PRRSGVDIDL FNLRVLPDST
TLVAVGEGGT VIRSTDAGNT WQSRPSGVNN SLYDLRVLPN STTLIAVGRS GAVIRSTDAG
NTWMPRPSGV DVDLYNLGIL ADGATLVAVG EDGTVIRSTD AGETWTFLPS VVDADLFNLG
ILPDSTTLVG VGESGTVIRS TDTDSTWMPR PSGVIADLYV PRVLPDGVTL IAVGSSGGII
RSTDAGMTWT PRPSGIDGNL FNFSVLPDSG ILVAVGSDGA VIRSTDAGVT WTPRPSGQDI
TLRDIRVLPD GTTLIAIGFF GAIVIIDDRY ADALAAIGPL SGSLGDNAYR SGIAGLPEYV
RNHPVVGALL AELDGTIEGR ADLETRLQSA RASADEIRTG GFSLAQRRQD FEEFMRVCTA
DLSDEAEGVG TEHCTRAYVD LRQAESQTVW EILAERAPQA ILLLFLLATL AALYRYNMRL
AGFHAARADA LHLYAMGRTH DPAILTEFSD ALAADKVEFG KGNTPSEQAV EIAKAMVGRR
G
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