| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1989 |
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| Symbol | |
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| ID | 3934441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1987997 |
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| End bp | 1989403 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904344 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_509931 |
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| Protein GI | 89054480 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.382914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.885594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TTTATTGGGT GCGGCGGGAC TTTCGCCTGT CGGACAATCC GGCGCTGGTG
GCGGCCTGCG AACGTGGCGC TGTGGTGCCG CTGTTCATTT GCGATGAGGT GATCGAGGGC
CACGGGGCAG CGCCGAAGTG GCGGCTTGGC CTTGGCGTGG AGGCGTTCGC CGAGGCGCTG
CACGCTGTCG GATCAAAGCT GATCCTGCGT CGCGGGGACG CTCTGCCGAC CCTGCGGGCC
GTTATCGCCG ATGTCTCTGC CAATGCTGTG CATTGGAACC GGCTCTATGA CCCCGACAGC
CGCAAGCGTG ATGAAGCGGT GAAAGCCGCG CTGAAAGAGG ACGGGGTCGA GGCCATCAGC
CACAAGGGGC ACGTGCTGTT TGAGCCCTGG ACGGTGGAGA CGAAGACGGG CGGCTACTAC
AAGGTTTACA CGCCGTTCTG GAAGATGGTG CGCGACCGTT CGCCGGGGGA GGCCTTGGCC
GCGCCCAAAA TCCCCGCGCC GGACACTTGG CCTGCGTCCG ATGACCTTAG CGACTGGCAC
CTTGGCAAGG CGATGAACCG GGGCGCGGAG GTTGTCGCCC CGCATCTGAA TGTCGGCGAA
CAGGCCGCGC AGGGGCGACT TGGCGCGTTC ATCGGCAATG GGATCGACGA CTATGCGGAT
GCCCGAGACA ACCTGGCGAA GAATGGCACA TCGTTGCTGT CTGAAAACCT CGCCTATGGG
GAGATCAGCG CCCGCCAATG CTGGCATGCG GGTCAGCGGG CCATGGCCGA CGGGAAGCCG
GGCGCGGAGA CGTTCTTGAA AGAAGTGGTC TGGCGCGATT TTGCCTACCA TCTGGTGCAT
CACACGCCCC GCATCACCAC CGCCAACTGG CGGGAGGAGT GGGAGGCGTT TCCCTGGAAC
ACCGACCCCG ACACACCGGA GGTCACGGCT TGGAAGCAGG GCCGCACCGG CATGGCCGTC
GTCGATGCCG CGATGCGCGA AATGTACGTG ACTGGGCGGA TGCACAACCG CGCCCGGATG
TTGGTGGCGT CCTACCTGAC CAAACACCTG ATGACCGATT GGAAGATCGG GATGGATTGG
TTCGAAGAGT GCCTTGTTGA TTGGGACCCG GCCAGCAACG CGATGGGGTG GCAATGGTCG
GCGGGCTCCG GCCCCGACGC GACGCCGTAT TTCCGCGTCT TCAATCCTGA AACTCAGGCG
GAGAAGTTCG ATAAAGCAGG GCGCTACCGG ATGCGCTGGT TGGCAGAAAT CACCGGCAAG
CCCCAAGATA CCGCATCGGC CTATTTCGAC GCGGTCCCCC GCGCCTGGGG CCTTGACCCC
ACGATGGGCT ACCCCAGTGC GCCCATCGTC ACAGCCTCCG AGGGCCGCAA ACGGGCATTG
GATGCCTACG AAAATCGTGG CTTCTGA
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| Protein sequence | MTTIYWVRRD FRLSDNPALV AACERGAVVP LFICDEVIEG HGAAPKWRLG LGVEAFAEAL
HAVGSKLILR RGDALPTLRA VIADVSANAV HWNRLYDPDS RKRDEAVKAA LKEDGVEAIS
HKGHVLFEPW TVETKTGGYY KVYTPFWKMV RDRSPGEALA APKIPAPDTW PASDDLSDWH
LGKAMNRGAE VVAPHLNVGE QAAQGRLGAF IGNGIDDYAD ARDNLAKNGT SLLSENLAYG
EISARQCWHA GQRAMADGKP GAETFLKEVV WRDFAYHLVH HTPRITTANW REEWEAFPWN
TDPDTPEVTA WKQGRTGMAV VDAAMREMYV TGRMHNRARM LVASYLTKHL MTDWKIGMDW
FEECLVDWDP ASNAMGWQWS AGSGPDATPY FRVFNPETQA EKFDKAGRYR MRWLAEITGK
PQDTASAYFD AVPRAWGLDP TMGYPSAPIV TASEGRKRAL DAYENRGF
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