| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1987 |
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| Symbol | alaS |
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| ID | 3934439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1985000 |
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| End bp | 1987654 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904342 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_509929 |
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| Protein GI | 89054478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC TCAACGACAT CCGCTCCACC TTCCTTGATT ACTTCGGGCG GCAGGGGCAC
GCGGTCGTGC CGTCCAGCCC GCTGGTGCCG CGCAACGATC CCACATTGAT GTTCGTCAAT
TCCGGTATGG TGCAGTTCAA GAACCTGTTC ACGGGGGTCG AGAAACGCGA CTATGTGCGC
GCCACGTCGT CCCAGAAATG TGTGCGCGCG GGCGGCAAGC ACAACGATCT GGACAATGTC
GGCTACACCG CGCGTCACCA CACGTTCTTC GAGATGCTCG GAAATTTCAG CTTTGGCGAT
TACTTCAAGG AAGACGCCAT TCGCTACGCG TGGGAGCTGA TTACCAAGGA CTTCGGCCTC
GACAAGGCGC GGCTTTACGT GACGGTTTAT CACACGGACG ACGAGGCGTT CGAGATCTGG
AAGAAGGTCG GCGTGCCGGA GGATCGGATC ATCCGCATCG CGACATCGGA CAATTTCTGG
CAGATGGGTC CGACGGGTCC TTGCGGGCCG TGTACCGAGA TTTTCTATGA CCACGGAGAG
CATATCTGGG GTGGCCCTCC GGGCAGCGCG GAGGAAGACG GCGACCGGTT CATCGAGATC
TGGAACATCG TGTTCATGCA GAATGAGCAG TTCGCGGACG GCACCATGGT GCCGCTGGAC
ATGCAGAGCA TCGACACCGG CATGGGGTTG GAGCGGATCG GCGCGCTGCT GCAAGGCTCC
CACGACAATT ACGACACCGA CACGATGCGC GCGCTGATGG AGGCGTCGGC GCACGCGTCC
TCCACCGATC TGGACGGCGA TCAGAACGTG CACCACCGGG TGATCGCGGA TCACCTCCGC
TCGACGTCGT TCCTGATAGC CGATGGGGTG ATGCCGTCCA ACGACGGGCG CGGCTATGTG
CTGCGCCGGA TCATGCGTCG CGCCATGCGG CACGCGCATC TGTTGGGTGC CAAGGACCCG
CTGATGTACC GCCTTGTGCC CGCGCTGGTG AGCCAGATGG GGCAGGCGTA TAGCGAGTTG
GGTCAGGCGC AGGCGTTGAT CACCGAGACG TTGAAGCTGG AGGAGGAACG GTTCCGCCAG
ACCTTGGATC GCGGTTTGAA GCTGTTGGAT GATGAGGTTG CCAAGCTGCC CGAAGACGGC
AACCTGCCCG GCGCGGCGGC GTTCAAACTC TATGACACTT ACGGCTTCCC GCTCGATCTG
ACCCAGGACG CCCTGCGCGA ACAGGGTCGT ACCGTGGACA CCGACGGGTT TGACGCTGCG
ATGGCCGAGC AGAAGGCCAA GGCGCGGGCG GCCTGGAGCG GGTCGGGTGA CGCGGCGGAT
GCCACGATCT GGTTCGATAT CGCCGAGAAG AATGGCGTGA CAGAGTTCCT TGGCTACGAC
ACGGAAGTGG CAGAGGGGCA GGTGTTGGCG CTGGTCGTGG ATGGTGCGCG TGTGGACAAG
GTCGCGTCTA ACCAGGACGT GATTTTCGTG ACCAATCAAA CGCCGTTCTA CGCGGAATCT
GGTGGCCAGG TGGGCGATAG CGGAACGATC AGAACGGAAA CGGGTGTGCT GCACGTCACC
GAGACCCGGA AGGTCGCCGG GGTTTTCCTG CATGTCGGGC AGGTCACTGA GGGCACGATT
AAGGTCGGGC AGGGCGCATC GTTGAGCGTT GATCATGAGC GTCGCCGCTA TATCTGCGCC
AACCACTCGG CCACGCACCT GCTGAATGAG GCGTTGCGTT GGGCGATTGG CGATAGCGTG
GTCCAGCGCG GATCGCTCAA TTCCCGCGAC AGGTTGCGGT TCGACTTCTC GCACAACAAG
CCAATGACCG CCGACGAGCT TGCGCAGGTT GAGGCCGAGG TGAACGACCT AATCACCCGC
AACACGGCCG TGGAAACGCG TGTGATGACA CCTGATGACG CGCGGGCGCT TGGGGCGCAG
GCGCTCTTTG GAGAGAAATA CGGCGATGAG GTGCGCGTTG TGTCGATGGG CCATCACGCG
GGATCGGGCA AGGGGTTGGA CAAGGATACG TATTCTATCG AATTATGTGG CGGCACCCAT
GTGAAGCGCA CCGGGGATAT CGGGCCGTTT GTGATTTTGA GCGAGTCGGC CTCTGCCGCG
GGTGTGCGTC GGATCGAGGC GCTGACCAAC CAAACGGCGA GCTTTTACCT GAGCGAACAG
AATGAGCGGA TGGGGCAGCT GGCAGCGGAG TTGAACACGC AAGCCGCAGA TGTGTTGGAC
CGTGTGAAGG CCCTGAAAGA CGACCGCAAG AAGCTGGAGA ACGAAGTGGC GCAGCTGCGC
CGCGAGTTGG CCATGGCTGG CGGGACCAGC GCGCCGGAGG CCGCAAGCGT TAACGGTGTT
AACTTTCACG CCCAGGCGCT GAGCGGCGTG ACGGGCAAGG ACCTGGCCGG GATCGTGGAT
GAACACAAAG CGCGGCTTGG CTCCGGTGCT GTGCTGCTGA TTGCGGATGC CGGCGGGAAG
GCCGCGGTGG CCGCGGGCGT CACGGAAGAT CTGACCGACA GGCTCAGCGC CGTCGATCTG
GTGCGCGCCG CCGTGGCCGA GCTGGGGGGC AAAGGTGGCG GTGGTCGTCC TGACTTTGCG
CAGGGCGGCG GCAAGGATGC GGCCAATGCA GAGGCCGCGA TTGCGGCGGC GAAAACTGTC
ATAGAAGGAG TGTAA
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| Protein sequence | MTSLNDIRST FLDYFGRQGH AVVPSSPLVP RNDPTLMFVN SGMVQFKNLF TGVEKRDYVR
ATSSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEDAIRYA WELITKDFGL
DKARLYVTVY HTDDEAFEIW KKVGVPEDRI IRIATSDNFW QMGPTGPCGP CTEIFYDHGE
HIWGGPPGSA EEDGDRFIEI WNIVFMQNEQ FADGTMVPLD MQSIDTGMGL ERIGALLQGS
HDNYDTDTMR ALMEASAHAS STDLDGDQNV HHRVIADHLR STSFLIADGV MPSNDGRGYV
LRRIMRRAMR HAHLLGAKDP LMYRLVPALV SQMGQAYSEL GQAQALITET LKLEEERFRQ
TLDRGLKLLD DEVAKLPEDG NLPGAAAFKL YDTYGFPLDL TQDALREQGR TVDTDGFDAA
MAEQKAKARA AWSGSGDAAD ATIWFDIAEK NGVTEFLGYD TEVAEGQVLA LVVDGARVDK
VASNQDVIFV TNQTPFYAES GGQVGDSGTI RTETGVLHVT ETRKVAGVFL HVGQVTEGTI
KVGQGASLSV DHERRRYICA NHSATHLLNE ALRWAIGDSV VQRGSLNSRD RLRFDFSHNK
PMTADELAQV EAEVNDLITR NTAVETRVMT PDDARALGAQ ALFGEKYGDE VRVVSMGHHA
GSGKGLDKDT YSIELCGGTH VKRTGDIGPF VILSESASAA GVRRIEALTN QTASFYLSEQ
NERMGQLAAE LNTQAADVLD RVKALKDDRK KLENEVAQLR RELAMAGGTS APEAASVNGV
NFHAQALSGV TGKDLAGIVD EHKARLGSGA VLLIADAGGK AAVAAGVTED LTDRLSAVDL
VRAAVAELGG KGGGGRPDFA QGGGKDAANA EAAIAAAKTV IEGV
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