Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1987 |
Symbol | alaS |
ID | 3934439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1985000 |
End bp | 1987654 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904342 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_509929 |
Protein GI | 89054478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCC TCAACGACAT CCGCTCCACC TTCCTTGATT ACTTCGGGCG GCAGGGGCAC GCGGTCGTGC CGTCCAGCCC GCTGGTGCCG CGCAACGATC CCACATTGAT GTTCGTCAAT TCCGGTATGG TGCAGTTCAA GAACCTGTTC ACGGGGGTCG AGAAACGCGA CTATGTGCGC GCCACGTCGT CCCAGAAATG TGTGCGCGCG GGCGGCAAGC ACAACGATCT GGACAATGTC GGCTACACCG CGCGTCACCA CACGTTCTTC GAGATGCTCG GAAATTTCAG CTTTGGCGAT TACTTCAAGG AAGACGCCAT TCGCTACGCG TGGGAGCTGA TTACCAAGGA CTTCGGCCTC GACAAGGCGC GGCTTTACGT GACGGTTTAT CACACGGACG ACGAGGCGTT CGAGATCTGG AAGAAGGTCG GCGTGCCGGA GGATCGGATC ATCCGCATCG CGACATCGGA CAATTTCTGG CAGATGGGTC CGACGGGTCC TTGCGGGCCG TGTACCGAGA TTTTCTATGA CCACGGAGAG CATATCTGGG GTGGCCCTCC GGGCAGCGCG GAGGAAGACG GCGACCGGTT CATCGAGATC TGGAACATCG TGTTCATGCA GAATGAGCAG TTCGCGGACG GCACCATGGT GCCGCTGGAC ATGCAGAGCA TCGACACCGG CATGGGGTTG GAGCGGATCG GCGCGCTGCT GCAAGGCTCC CACGACAATT ACGACACCGA CACGATGCGC GCGCTGATGG AGGCGTCGGC GCACGCGTCC TCCACCGATC TGGACGGCGA TCAGAACGTG CACCACCGGG TGATCGCGGA TCACCTCCGC TCGACGTCGT TCCTGATAGC CGATGGGGTG ATGCCGTCCA ACGACGGGCG CGGCTATGTG CTGCGCCGGA TCATGCGTCG CGCCATGCGG CACGCGCATC TGTTGGGTGC CAAGGACCCG CTGATGTACC GCCTTGTGCC CGCGCTGGTG AGCCAGATGG GGCAGGCGTA TAGCGAGTTG GGTCAGGCGC AGGCGTTGAT CACCGAGACG TTGAAGCTGG AGGAGGAACG GTTCCGCCAG ACCTTGGATC GCGGTTTGAA GCTGTTGGAT GATGAGGTTG CCAAGCTGCC CGAAGACGGC AACCTGCCCG GCGCGGCGGC GTTCAAACTC TATGACACTT ACGGCTTCCC GCTCGATCTG ACCCAGGACG CCCTGCGCGA ACAGGGTCGT ACCGTGGACA CCGACGGGTT TGACGCTGCG ATGGCCGAGC AGAAGGCCAA GGCGCGGGCG GCCTGGAGCG GGTCGGGTGA CGCGGCGGAT GCCACGATCT GGTTCGATAT CGCCGAGAAG AATGGCGTGA CAGAGTTCCT TGGCTACGAC ACGGAAGTGG CAGAGGGGCA GGTGTTGGCG CTGGTCGTGG ATGGTGCGCG TGTGGACAAG GTCGCGTCTA ACCAGGACGT GATTTTCGTG ACCAATCAAA CGCCGTTCTA CGCGGAATCT GGTGGCCAGG TGGGCGATAG CGGAACGATC AGAACGGAAA CGGGTGTGCT GCACGTCACC GAGACCCGGA AGGTCGCCGG GGTTTTCCTG CATGTCGGGC AGGTCACTGA GGGCACGATT AAGGTCGGGC AGGGCGCATC GTTGAGCGTT GATCATGAGC GTCGCCGCTA TATCTGCGCC AACCACTCGG CCACGCACCT GCTGAATGAG GCGTTGCGTT GGGCGATTGG CGATAGCGTG GTCCAGCGCG GATCGCTCAA TTCCCGCGAC AGGTTGCGGT TCGACTTCTC GCACAACAAG CCAATGACCG CCGACGAGCT TGCGCAGGTT GAGGCCGAGG TGAACGACCT AATCACCCGC AACACGGCCG TGGAAACGCG TGTGATGACA CCTGATGACG CGCGGGCGCT TGGGGCGCAG GCGCTCTTTG GAGAGAAATA CGGCGATGAG GTGCGCGTTG TGTCGATGGG CCATCACGCG GGATCGGGCA AGGGGTTGGA CAAGGATACG TATTCTATCG AATTATGTGG CGGCACCCAT GTGAAGCGCA CCGGGGATAT CGGGCCGTTT GTGATTTTGA GCGAGTCGGC CTCTGCCGCG GGTGTGCGTC GGATCGAGGC GCTGACCAAC CAAACGGCGA GCTTTTACCT GAGCGAACAG AATGAGCGGA TGGGGCAGCT GGCAGCGGAG TTGAACACGC AAGCCGCAGA TGTGTTGGAC CGTGTGAAGG CCCTGAAAGA CGACCGCAAG AAGCTGGAGA ACGAAGTGGC GCAGCTGCGC CGCGAGTTGG CCATGGCTGG CGGGACCAGC GCGCCGGAGG CCGCAAGCGT TAACGGTGTT AACTTTCACG CCCAGGCGCT GAGCGGCGTG ACGGGCAAGG ACCTGGCCGG GATCGTGGAT GAACACAAAG CGCGGCTTGG CTCCGGTGCT GTGCTGCTGA TTGCGGATGC CGGCGGGAAG GCCGCGGTGG CCGCGGGCGT CACGGAAGAT CTGACCGACA GGCTCAGCGC CGTCGATCTG GTGCGCGCCG CCGTGGCCGA GCTGGGGGGC AAAGGTGGCG GTGGTCGTCC TGACTTTGCG CAGGGCGGCG GCAAGGATGC GGCCAATGCA GAGGCCGCGA TTGCGGCGGC GAAAACTGTC ATAGAAGGAG TGTAA
|
Protein sequence | MTSLNDIRST FLDYFGRQGH AVVPSSPLVP RNDPTLMFVN SGMVQFKNLF TGVEKRDYVR ATSSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEDAIRYA WELITKDFGL DKARLYVTVY HTDDEAFEIW KKVGVPEDRI IRIATSDNFW QMGPTGPCGP CTEIFYDHGE HIWGGPPGSA EEDGDRFIEI WNIVFMQNEQ FADGTMVPLD MQSIDTGMGL ERIGALLQGS HDNYDTDTMR ALMEASAHAS STDLDGDQNV HHRVIADHLR STSFLIADGV MPSNDGRGYV LRRIMRRAMR HAHLLGAKDP LMYRLVPALV SQMGQAYSEL GQAQALITET LKLEEERFRQ TLDRGLKLLD DEVAKLPEDG NLPGAAAFKL YDTYGFPLDL TQDALREQGR TVDTDGFDAA MAEQKAKARA AWSGSGDAAD ATIWFDIAEK NGVTEFLGYD TEVAEGQVLA LVVDGARVDK VASNQDVIFV TNQTPFYAES GGQVGDSGTI RTETGVLHVT ETRKVAGVFL HVGQVTEGTI KVGQGASLSV DHERRRYICA NHSATHLLNE ALRWAIGDSV VQRGSLNSRD RLRFDFSHNK PMTADELAQV EAEVNDLITR NTAVETRVMT PDDARALGAQ ALFGEKYGDE VRVVSMGHHA GSGKGLDKDT YSIELCGGTH VKRTGDIGPF VILSESASAA GVRRIEALTN QTASFYLSEQ NERMGQLAAE LNTQAADVLD RVKALKDDRK KLENEVAQLR RELAMAGGTS APEAASVNGV NFHAQALSGV TGKDLAGIVD EHKARLGSGA VLLIADAGGK AAVAAGVTED LTDRLSAVDL VRAAVAELGG KGGGGRPDFA QGGGKDAANA EAAIAAAKTV IEGV
|
| |