| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1984 |
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| Symbol | |
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| ID | 3934436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1980629 |
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| End bp | 1982887 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904339 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_509926 |
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| Protein GI | 89054475 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.684295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCCTG TCGTCCTTCT GGTCCTGGGG GTCGTCACGG GCGTGGCCAC ATGGTTCGCG
CCTGGGCCGG AGCTTCGCTT TGGCCTGATG GCTGCCACCG GTGGCTGCCT GGCCGCTGCG
GGCCTTGTTG CCCTGCGCGA TATCTGGCGC GTTTGGCGCC TGCAAAACAC GTTTCAGGCG
GCGTTTGCGC TGATTGAACA TGACCCAGCC CCCAGCTTCT GCACAGATGA AGACGGCGCG
ATTGTCCTGC AGAACGCCGC GGCGGAGCGG CGGTTTGGCG AACGGCTTGG CCTGCCGATG
ACGCGGGCGA TTGCGGGGGC CTTGCCCAAT GCGGCGGCGG TTGTTTTCCG GCAGGAGACT
GCCCTTGGGC GGCGACCATC GGCCCATGAA GTTGTCGTCA CGCCCCGCGG CACGGTGCGC
CTTGCGGCCC ATCGGTTGAA TGGCGGCGTC ATTTGGCGGC TGGATGATAT GGCCGATGCG
AACTCTCGTC ACGGCGAATG GATTGGCCTG CCGATGATGG TCGTCAGCCA CAACGACACG
GTCCTGTCGA TGAATTCCGC CATGCGGGAT GTGCTGGGGC GGCGCGCGAC GACGCTGGAA
GATGTCTTTC CGGATCAACC GCTTGTGGCG GGCAGACGGT CCAGCCTGTC GGGCGCGGAT
GGCAAGATTG AAGTGATCCC GATCGTCGTT CCCTCCAAGG ATGGCCGGAG GGAGGTTTAT
GCCGTGCCGG GCCTGTCGGA GCCTCCCGCG GCCTCCGTCG CGGCGCGCGC GTTTGAATCG
CTGCCTGTGG CACTCCTGCA CATCAGCGCG GATGGGGAGG TTTTGGCCTC CAATCACCAT
GCCCAGAAGT TGCTGGGGAT TGAGGCCTCG ACCACCGGTC CGATGGCGCA ATTCGTCGAA
AACCTGGGCC GTCCCGTGGG CGATTGGGTC GCCGATACCC TGGCTGAGAG GGTGCCCAAC
CGCTCGGAAG TGGCCCGCGC CAAGCAGCGC CGGGATGAGA CGTTCCTGCA AATCTCGCTG
AGCCGTATTG TCGACGGAAC CGGGCCATCG CTTCTGGCGG TGCTCCATGA TGCGACCGAG
TTGAAGACGC TGGAGCAGCA ATTCGTCCAG AGCCAGAAAA TGCAGGCGAT CGGAGAGCTT
GCGGGCGGCG TGGCCCATGA CTTCAACAAC CTGCTCACGG CAATCACCGG GCATTGTGAT
TTGCTGCTTC TGCGTCACGA CCAGGGCGAT CAGGACTACG CGGATCTGGT GCAGATCAAC
CAGAACGCCA ACCGTGCAGC AAGCCTTGTG GGCCAGCTTC TGGCGTTTTC GCGCAAGCAG
ACGCTGGAGC CTGAGGTTCT CGATCTGCGC GACTCAATCG GAGAATTGAC TCATCTTCTC
AACCGTCTGG TGGGGGAGCG GATTTCGCTA TCGCTGTCGA ACGATCCTGA CCTGGCCCCG
ATCCGCGCCG ACCGGCGGCA ACTTGATCAG GTGATCATGA ACCTTGTGGT GAATGCGCGG
GACGCGATGG CCGATGGTGG CGAGGTCCGG GTCGAGACGC GCATGGTGCA TCTGGCCGAG
CCGATGTCGC GCGATCAGGC GATTGTGCCC GCTGGATCTT ACGTGACGAT CCGCGTGCGC
GATCACGGCC ACGGCATTCC GCCCGACAAG CTGCACCGCA TTTTCGAGCC GTTCTTCACC
ACCAAACGCA CCGGGGAGGG GACGGGTCTG GGCCTGTCGA TGGCCTACGG CATCGTCAAG
CAAACGGGGG GCTATATCTT CGTGGACAGC GTCGTCGGCT CTGGCACCAC GTTCACAATC
TACATTCCGG CCCATGATGT GGTGAACTCA GAGGCCGCTC CGGATTTGAT CGAGGGCAAG
GCGACCGAGA TCAACGAGGC GCTGGCGGAC ACACGCCCCG GCGTGGTCCT GTTGGTGGAA
GATGAAGCGC CCGTGCGGGC CTTTGCCTCC CGTGCCCTTC GCCTGCGGGG CTACACGGTG
CTGGAGGCCG GTTGCGGAGA GGAGGCGTTG GACACGCTCG CAGACCCGGA GTTGGAGATT
GACCTTTTCG TCACCGACGT GATCATGCCC GGTCTGGATG GCCCGTCCTG GGTGCGGAAA
GCCCTGGAAG AGCGACCGGA CACCAAAGTC GTGTTCGTGT CGGGTTATGC GGAGGACGCG
ATGGAGGAGG GGTCGATTGG GGTTGAGGGG TCGGTTTTCC TGCCGAAGCC GTTCTCGCTC
ACCGACTTGA CGGAGACGGT GCGCCAACAG CTCCAGTAG
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| Protein sequence | MQPVVLLVLG VVTGVATWFA PGPELRFGLM AATGGCLAAA GLVALRDIWR VWRLQNTFQA
AFALIEHDPA PSFCTDEDGA IVLQNAAAER RFGERLGLPM TRAIAGALPN AAAVVFRQET
ALGRRPSAHE VVVTPRGTVR LAAHRLNGGV IWRLDDMADA NSRHGEWIGL PMMVVSHNDT
VLSMNSAMRD VLGRRATTLE DVFPDQPLVA GRRSSLSGAD GKIEVIPIVV PSKDGRREVY
AVPGLSEPPA ASVAARAFES LPVALLHISA DGEVLASNHH AQKLLGIEAS TTGPMAQFVE
NLGRPVGDWV ADTLAERVPN RSEVARAKQR RDETFLQISL SRIVDGTGPS LLAVLHDATE
LKTLEQQFVQ SQKMQAIGEL AGGVAHDFNN LLTAITGHCD LLLLRHDQGD QDYADLVQIN
QNANRAASLV GQLLAFSRKQ TLEPEVLDLR DSIGELTHLL NRLVGERISL SLSNDPDLAP
IRADRRQLDQ VIMNLVVNAR DAMADGGEVR VETRMVHLAE PMSRDQAIVP AGSYVTIRVR
DHGHGIPPDK LHRIFEPFFT TKRTGEGTGL GLSMAYGIVK QTGGYIFVDS VVGSGTTFTI
YIPAHDVVNS EAAPDLIEGK ATEINEALAD TRPGVVLLVE DEAPVRAFAS RALRLRGYTV
LEAGCGEEAL DTLADPELEI DLFVTDVIMP GLDGPSWVRK ALEERPDTKV VFVSGYAEDA
MEEGSIGVEG SVFLPKPFSL TDLTETVRQQ LQ
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