| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1970 |
|---|
| Symbol | |
|---|
| ID | 3934421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1963844 |
|---|
| End bp | 1964518 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904324 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_509912 |
|---|
| Protein GI | 89054461 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.59391 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAATT TCGTCGAATA CCCCGACCAA GAAATGATGA TGCTGGATCT TGCGGACCGG
CTGACCGGAG AGTTGGCCGA TTGCCTGCGC CGCCACGACA GCGCCACGCT ATGCGTGCCC
GGCGGCACCA CGCCGGGTCC GATCTTCGAT GTGTTGAGCG AGCAGGCGCT GGACTGGGAC
CGTGTCTTTG TCGTGCTGAA CGATGAGCGA TGGGTGGACG AGGATAGTCC GCGATCCAAT
ACAGCCATGC TGCGACAAAA GTTATTTGTG TCAAAGGCTT CCGGTGCGAC GCTCATCCCA
TTGTTCAAAA GCGGTCTAAC CGCCGAAGAG GCGATGGACG AGCTGATTGA GGGCTTTGAA
GGCCATCTGC CGATCTCGGT CCTTGTGTTG GGAATGGGCG CGGATATGCA CACGGCGAGC
CTGTTTCGCG GTGCCGATAA TCTGACGGCG GCGCTGGCCT CTGATGCGCC TGTGCTGATG
CCGATGCGGG CGGACGGCGC GGGGGAGCCT CGGATCACGT TGACAGCGCC TGTTCTGAAC
GGTGCGCTCA GCAAACATGT GGTCATCACC GGGGCGGAGA AGCGTGCAGC ACTCGAACGC
GCCCTGCATT TGCCCCCGGA AGACGCGCCG ATCAGCGCGG TTCTGGCGGG CGCAACAGTC
CATTGGGCGG AGTAG
|
|---|
| Protein sequence | MRNFVEYPDQ EMMMLDLADR LTGELADCLR RHDSATLCVP GGTTPGPIFD VLSEQALDWD
RVFVVLNDER WVDEDSPRSN TAMLRQKLFV SKASGATLIP LFKSGLTAEE AMDELIEGFE
GHLPISVLVL GMGADMHTAS LFRGADNLTA ALASDAPVLM PMRADGAGEP RITLTAPVLN
GALSKHVVIT GAEKRAALER ALHLPPEDAP ISAVLAGATV HWAE
|
|---|
| |