| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1969 |
|---|
| Symbol | |
|---|
| ID | 3934420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1962402 |
|---|
| End bp | 1963847 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637904323 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_509911 |
|---|
| Protein GI | 89054460 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.906844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.668696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCGC GCGTCATTCC GGTCGAACCG TTTGATCTTG TCATATTTGG GGGCACGGGC
GATCTGGCCC GGCGTAAAAT CCTACCGGCG CTGTTCCGGC GGTTCAGCGA TGGGCAGATG
CCCGAGGGCG CGCGCATCAT CGGCGCGGCA CGGACCAAGC AAAGCGGCGC GGCCTGGGCC
AAATGGGTCC ATGAGGCGTT GAAAGAATTC CTTACAAAAG AGGAACTGGA CAAGGCGCTG
GTGAAGGCGT TTCTGGAGCG GCTCGATTAT CTGGCGATTG ACGCGACGGG GGACGGTGGA
TGGTCGGACC TGAAGGGCAA GATGCGCGAC GGCGTCACCC AGGCGTTTTA CTTCTCGGTC
GGTCCCAGCC TGTTCGGGGC GTTGGCAGAA CGTCTCCATG CCCACGACAT CGCCCACGCC
GATGCGCGCA TCGTGGTCGA AAAACCGTTT GGGCGCGACC TCGCCTCGGC CCGGGAGTTG
AACGGCACCC TGGCCGCGCA TTTCAACGAG ACGCAGATCT ACCGGATTGA TCACTATCTG
GGCAAGGAAA CGGTCCAGAA CCTCATGGCG ATCCGCTTCG GCAATGTCCT GTTCGAGCCG
CTTTGGAACG CGCAATACAT TGATCACGTG CAGATCACCG TGGCCGAAAC CGTCGGCGTG
GATGGGCGCG GAGCGTATTA CGATAAATCG GGCGCGATGC GCGATATGGT GCAGAACCAC
CTGATGCAGC TGCTCTGCCT GACGGCGATG GAGCCGCCCA ACAAGTTTGA GCCTGACGCG
GTGCGCGATG AGAAGCTGAA GGTGATCCGC GCGCTCGACC CTGTGGCACC AGCCGATATC
GTGCGTGGGC AGTATCAGGG CAAGCAGGGC TCCTATCTGG AAGATGTGGA GGATCCCGGC
TCCAACACCG AAAGCTACAT CGCGATGAAG CTGCACGTGG CCAACTGGCG CTGGAACGGC
ACGCCATTCT ATCTGCGGAC GGGCAAATGC CTGAAATCGC GCAAGTCCGA GATTGTGGTG
CATTTCAAGG AAACGCCGCA TTCGATCTTT GAGGCCGATG CGGGCAGCCA CGCCAATGTT
CTGTCGATCC GCCTGCAACC CGATGAGGGG ATCAAGCTGC GCGTCACGAT CAAGGAGCCG
GGACCCGGCG GCATGCGTTT GGTGGATGTG CCGCTCGACA TGACGTTCGC GGAGGCACTG
GGGCCAGATG TGGGCCGGGT GCCGGACGCC TATGAGCGGC TGATCATGGA TGTGATCCGG
GGCAATCAGA CCCTGTTCAT GCGCGGCGAT GAGGTGGAGG CGGCCTGGGC CTGGACCGAT
CCGATCATCG GCGGCTGGAA GGCGCGGAGC GAAAAGCCGG TCGCCTATGA CACCGGCTCG
ACCGGCCCGG AAGAGGCGCT GATGCTGCTG CACCGGGACG GCCGCAGATG GAGGGATTTG
TCATGA
|
|---|
| Protein sequence | MVSRVIPVEP FDLVIFGGTG DLARRKILPA LFRRFSDGQM PEGARIIGAA RTKQSGAAWA
KWVHEALKEF LTKEELDKAL VKAFLERLDY LAIDATGDGG WSDLKGKMRD GVTQAFYFSV
GPSLFGALAE RLHAHDIAHA DARIVVEKPF GRDLASAREL NGTLAAHFNE TQIYRIDHYL
GKETVQNLMA IRFGNVLFEP LWNAQYIDHV QITVAETVGV DGRGAYYDKS GAMRDMVQNH
LMQLLCLTAM EPPNKFEPDA VRDEKLKVIR ALDPVAPADI VRGQYQGKQG SYLEDVEDPG
SNTESYIAMK LHVANWRWNG TPFYLRTGKC LKSRKSEIVV HFKETPHSIF EADAGSHANV
LSIRLQPDEG IKLRVTIKEP GPGGMRLVDV PLDMTFAEAL GPDVGRVPDA YERLIMDVIR
GNQTLFMRGD EVEAAWAWTD PIIGGWKARS EKPVAYDTGS TGPEEALMLL HRDGRRWRDL
S
|
|---|
| |