Gene Jann_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1965 
Symbol 
ID3934416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1958480 
End bp1959145 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID637904319 
Productphospholipase/carboxylesterase 
Protein accessionYP_509907 
Protein GI89054456 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0342368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.433587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG TGCTGGATTA CGGAACGAAA CCCTCGGCGT CAGGCGATGT GACGTCGCTG 
GTGGTGTTCC TGCACGGCTA TGGCGCCGAT GGGCGGGACC TTCTGGGGCT GGCCGACCCG
CTGGCCGAGC ATATGCCCAA CACCGTTTTC GTGGCCCCAG ATGCGCCGGA ACGCTCGGCC
ATGAACCCCG CGGGGTTTCA GTGGTTTCCG ATCCCGTGGA TTGACGGATC AAGCGAGGCC
GCCGCAGCCG AAGGCATGGC GCGCGCCGTC ATCGACCTGA ACGCATTCCT CGATCACGTG
ATGGAGGAGC ATGGGGTGAG TGCGGCAGAG ACCGCCTTGG TGGGCTTTTC CCAAGGTACG
ATGATCTCGC TCCATGTCGC GCCGCGTCGC GAGGAGGCGT TTGCAGGTGT CGTGGGCTTT
TCGGGCCGAT TGATTGAGCC GGAGGCGTTG ATCGACGACG TGGTCGTGCG TCCACCGGTC
CTGTTGATCC ACGGCGACGC AGATGACGTC GTCCCGCCCC AATCCCTGCC GGAAGCGGCG
GAGGGGTTGG AGGCCGCGGG CTGGGAAGAG GTCTACGCCC ATGTCATGAA GGGCACGGCC
CACGGGATCG CGCCCGACGG GCTCAGCGTC GCGCTGGCGT TTCTGCGGGA TAAATTGCCA
AGCTGA
 
Protein sequence
MKNVLDYGTK PSASGDVTSL VVFLHGYGAD GRDLLGLADP LAEHMPNTVF VAPDAPERSA 
MNPAGFQWFP IPWIDGSSEA AAAEGMARAV IDLNAFLDHV MEEHGVSAAE TALVGFSQGT
MISLHVAPRR EEAFAGVVGF SGRLIEPEAL IDDVVVRPPV LLIHGDADDV VPPQSLPEAA
EGLEAAGWEE VYAHVMKGTA HGIAPDGLSV ALAFLRDKLP S