Gene Jann_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1957 
Symbol 
ID3934408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1950757 
End bp1951083 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content62% 
IMG OID637904311 
Producthypothetical protein 
Protein accessionYP_509899 
Protein GI89054448 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.391751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.414942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGGG GCTTCGTAGA CATTTATTGC CGGGGCCTGT TGGGCACAGC GCGCACCACG 
CCGTTCGGGG ACGATGTGGT GATCTGGACG GTCCATGGCC ACATGTTCGC CGCCTACGCG
CAGGACGGTG AAGGGCTGTC GCTGCGCATT GCCGACAAGA TCACCGCGCA TCAACTGGTC
GGGCAGAAGC GGGCCGTGAC CTCTCCCTAT CTCAAAGGCA CGGGGTGGGT CCTGTTTCCG
TGGGAGACAG CGCCGACGGA ATTGCGGGAC TGGATCTTCA AGAGCTACCG GCTGGTTTTG
AACGATGGCA ATACGGGCGT GAGCTGA
 
Protein sequence
MQRGFVDIYC RGLLGTARTT PFGDDVVIWT VHGHMFAAYA QDGEGLSLRI ADKITAHQLV 
GQKRAVTSPY LKGTGWVLFP WETAPTELRD WIFKSYRLVL NDGNTGVS