| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1956 |
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| Symbol | |
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| ID | 3934407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1949481 |
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| End bp | 1950677 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904310 |
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| Product | aminotransferase |
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| Protein accession | YP_509898 |
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| Protein GI | 89054447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.476214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.491407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCT TTTCCAAAAG AATTGCCGGA TTGAACGGCG GAGGGGATGA CGGCTGGGGC
CTGTTCATCC GCGCGCGCCA GATGAAGGAT GCAGGCCAGC CGGTGCTGGA GCTGACCATC
GGGGAGCATG ACACGCGGAC CGCACCCGAC ATTCTGGACG CGATGATGAC GTCGGCGCGG
GGCGGGCATA CGGGCTATGC CGCCGTGCCC GGCACCGATG CGCTGCGGGC GGCGGTGGCC
AAGCGATTGT CCACCTTCAG TGATCTGGCT TACGGCCCCG AGAACATCCT GATCACCCCC
GGCGGCCAGT CGGCGCTGTT TGCGGCCCAT AGCCTGGCCT GCGATCCCGG TGACACCGCC
CTTATGATCG ACCCCCATTA TGCCACCTAT CCCGGCACGA TCCGGGGTGT CAGTGCCGTG
CCAAAGCCCG TCGTGGCCCA CCCCGAGGAC GGGTTTCAGC CGCGCGAGGC GGATCTGATG
GCGGCCAGTG AGGGGGCGAG AAGCCTGCTG ATCAACACGC CCAACAATCC CACGGGGGCG
GTCTATTCCG ATGCCACGCT GGATGGGATC GCGCGGGTCG CGGAGGCGCG TGATCTTTGG
GTCATCTCTG ACGAGGTCTA TGACAGTCAG GTCTGGGACG GGCGGCACCG GCCCTTCGCC
AGCCTGCCCG GCATGTTCGC GCGGACGCTG AGTGTGGGGT CGCTGTCGAA AAGTCACGCG
ATGACGGGGT CGCGGCTGGG TTGGGTGGCG GGGCCTGCGC AGGCGATTGC GCATCTGATC
AACCTGGCCA CCAACACGAC CTACGGCGTT CCGGGCTACA TCCAGGATGC GGGCCTCTAT
GCCCTGTCGC TCGGGGCGGA GGCCGAGGCC GCTGTCGCCG CCCCCTTCCG CCGTCGCCGC
GATATGGTGC TGAGCCGTCT GGAGGGCCAA CAGGCGATCG GCGCAATTCC ACCGGCAGGC
GCGATGTACG TAATGCTGGA TATCCGCGCT ACGGGCCTGA GTGGGGAGGC CTTCGGCGAG
GCGCTGCTGG ACGAGGAACT GGTGGCCGTC ATGCCGGGAG AAAGTTTTGG GACGGCCGCC
GCGGGCCATA TCCGCGTGGC GCTGACCCTG CCCGATGACG TGTTCGAAGT GGCGCTGGAT
CGCCTGTTCG CCTTTGCCGC CCGACGCATC GGCGCCGCGG CGGAGGCGAC AGGTTAA
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| Protein sequence | MPAFSKRIAG LNGGGDDGWG LFIRARQMKD AGQPVLELTI GEHDTRTAPD ILDAMMTSAR
GGHTGYAAVP GTDALRAAVA KRLSTFSDLA YGPENILITP GGQSALFAAH SLACDPGDTA
LMIDPHYATY PGTIRGVSAV PKPVVAHPED GFQPREADLM AASEGARSLL INTPNNPTGA
VYSDATLDGI ARVAEARDLW VISDEVYDSQ VWDGRHRPFA SLPGMFARTL SVGSLSKSHA
MTGSRLGWVA GPAQAIAHLI NLATNTTYGV PGYIQDAGLY ALSLGAEAEA AVAAPFRRRR
DMVLSRLEGQ QAIGAIPPAG AMYVMLDIRA TGLSGEAFGE ALLDEELVAV MPGESFGTAA
AGHIRVALTL PDDVFEVALD RLFAFAARRI GAAAEATG
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