| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1953 |
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| Symbol | |
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| ID | 3934404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1945899 |
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| End bp | 1947704 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904307 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_509895 |
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| Protein GI | 89054444 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0750958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTCG ACCCGCGCAT CGCCGATATC ACGGACCGTA TCATCGAGCG GTCCCGCCCC
ACGCGGGAGC CGTATCTTGA GCGGATGCGC AAGCTGGCCG AAGATGGCCC CCGTCGCGCG
CATCTGACCT GTGGCAATCA GGCTCACGCC TATGCGGCCA TGGGGGGTGA CAAGGACGCG
CTGGTGGCCG CGCATGCGCC CAATATCGGG ATCGTGACGG CCTATAACGA TATGCTGTCG
GCCCACCAAC CCTTTGAAAC CTATCCGCAA AAAATCAAGG ATGCCGCGCG GGGGATTGGG
GCCACGGCCC AGGTCGCGGG CGGTGTGCCT GCGATGTGTG ATGGCGTCAC GCAGGGGCAG
GTGGGCATGG AACTGTCGCT CTTCTCCCGC GACGTTATCG CCATGGCGGC AGGGGTGGCG
CTGTCGCACA ACACGTTTGA CGCGGCCCTC TATCTGGGGG TGTGCGACAA GATCGTGCCG
GGCCTTGTCA TCGCGGCGGC GACATTCGGC TATATCCCCG CGCTGTTCGT GCCCGCAGGT
CCCATGGTCT CCGGCCTGCC CAACGACGAG AAGGCGCGCG TGCGTCAGCA ATTCGCCGCC
GGTGAGGTGG GCCGTGACAA GTTAATGGAG GCGGAAATGG CCTCCTATCA CGGGCCGGGC
ACCTGCACCT TCTACGGCAC CGCCAATTCC AACCAGATGT TGATGGAATT CATGGGGTTG
CACCTGCCCG GGGCCTCCTT CGTCAACCCC GGCACGCCGC TGCGTGATGC CCTCACCATA
GCGGCAACGG AACGCGCCGC CTCCATCACC GCGCTTGGCA ACGCCTATAC GCCCGTCTGC
GATATCCTCG ATGAGAAGGC CTTTGTAAAC GGCCTCGTGG GCCTCATGGC CACGGGCGGC
TCCACCAACC TGGTCATCCA CCTCATCGCC ATGGCGCGCG CGGCCGGCAT CATCCTGCAA
TGCAATGATT TCAACGACAT CTCGGAAGCC ACGCCGCTGA TGGCGCGCGT CTACCCCAAT
GGCTTGGCAG ATGTGAACCA CTTCCACGCC GCCGGGGGCC TTGGCTATAT GATCGGCCAA
TTGCTGGATG CGGGCCTGAT GCATGACGAC GTCAAAACCG CCGCTGGCGA CGGCCTGTCG
CTCTACACGC AGGAACCCGC GCTGAATGAC GGCGCGTTCC ACTATCGGGA CGGCCCGAAA
GAGACGCTGA ATGACAAGAT CCTCCGCCCC CCGTCCGATC CTTTCGCCGC CACGGGTGGT
CTGGCGGAGC TGAAAGGCAA CCTTGGCATC GGCGTCATGA AGGTCTCTGC CGTTGATCCC
GAGCGGCATT GTATCGAGGC GCCCGCCGCC ATTTTCCACT CCCAGGACGC GGTCAAGGAA
GCGTTCAAGA ACAATGAGTT GGAGCGCGAC GTTGTTGTGG TCGTCCGCTT CCAGGGCCCC
AAGGCCAATG GCATGCCGGA ACTCCATTCC CTCACGCCGC TGCTGTCGAT CTTGCAGGGC
CGTGGCCACC GCGTGGCGCT GGTGACCGAT GGCCGCATGT CCGGCGCGTC CGGCAAGGTC
CCCTCTGCCA TCCATGTCGC GCCAGAGGCC TTGGACGGCG GCCTTATCGG CAAACTTCAG
GACGGGGATC TCATCCGGGT CGATGCCAAA AACGGAACGC TCGACGTGCT GACCAACGGC
GTTGCGGCTC GGGCACCGGT CACCGCAGAT CTCTCGGGCA ACAGCCACGG TGTGGGTCGC
GAGCTGTTTG AAATCTTCCG CCAATCCGCG GGCCCCGCTA CCACCGGCGC GGGTGTTGTG
GTCTAA
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| Protein sequence | MPLDPRIADI TDRIIERSRP TREPYLERMR KLAEDGPRRA HLTCGNQAHA YAAMGGDKDA
LVAAHAPNIG IVTAYNDMLS AHQPFETYPQ KIKDAARGIG ATAQVAGGVP AMCDGVTQGQ
VGMELSLFSR DVIAMAAGVA LSHNTFDAAL YLGVCDKIVP GLVIAAATFG YIPALFVPAG
PMVSGLPNDE KARVRQQFAA GEVGRDKLME AEMASYHGPG TCTFYGTANS NQMLMEFMGL
HLPGASFVNP GTPLRDALTI AATERAASIT ALGNAYTPVC DILDEKAFVN GLVGLMATGG
STNLVIHLIA MARAAGIILQ CNDFNDISEA TPLMARVYPN GLADVNHFHA AGGLGYMIGQ
LLDAGLMHDD VKTAAGDGLS LYTQEPALND GAFHYRDGPK ETLNDKILRP PSDPFAATGG
LAELKGNLGI GVMKVSAVDP ERHCIEAPAA IFHSQDAVKE AFKNNELERD VVVVVRFQGP
KANGMPELHS LTPLLSILQG RGHRVALVTD GRMSGASGKV PSAIHVAPEA LDGGLIGKLQ
DGDLIRVDAK NGTLDVLTNG VAARAPVTAD LSGNSHGVGR ELFEIFRQSA GPATTGAGVV
V
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