| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1952 |
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| Symbol | |
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| ID | 3934403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1944951 |
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| End bp | 1945766 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904306 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_509894 |
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| Protein GI | 89054443 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3708] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0598764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.641899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGC TCGACAAGAT GATCTGGCAT ATCGAGACAC AGCTGGATGC GCCTTTGACG
CTGGAGACCT TGGCCGACCG CTGCGCCGTC AACGTGCATC ACATGTGCCG GGCGTTTCAG
TTCAGCACCG GGCTGTCGGT GATGGCCTAT GTGCGGGCAA GGCGGTTGAG CCGGGCGGCC
CATGTTCTGG CGGACGGTGA GGCCGACATC CTCACCATGG CGCTGGAGGC CGGATACGGA
TCCCATGAAG CGTTCACGCG GGCCTTTCGC GCCTATCTGG GGGTCCTGCC CTCACAGGTG
AAAGAGGCCT GCGATCTTTC CAACCTCAGT TTGATGGAGC CTTTAAAGAT GGACAATTCA
AGGATCATAG ACGTGGCGAA ACCCGAGATC AGGACCCGCG AGGCGTTTCG CGTGGTGGGG
TTTGGGGCGG ATGTCACAGG CTTTGACATC AGCGCCATTC CCGGCCTGTG GCAAAGATTT
GCGGCACAAT ATCAGGAGCT TGGAGCCGAT GGCGTAACCT ATGGGGTCAG CTATGATATC
GGGGAGGATG GCGACTTTCG CTACATCGCG GGATTGGAAT GGCCCGACGT GCCCGACGGA
ATGGTGACGG TGGATCTCCC CGCCGCGCGC TATGCGGTCT TCACCCATGA TGGCCATATC
GGCGATCTGC CCAAGATGAT CTACACGATC TGGAACAAGG CCCTGCCCGG CTCGGGTCTG
GAGCCCGCCA CAACGCCGGA GTTTGAGCTG TACGACCACC GGTTCAACGC CGTGACGGGG
CTTGGCGTCG TGGAGCACTG GGTGCCGCTG GTCTGA
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| Protein sequence | MPLLDKMIWH IETQLDAPLT LETLADRCAV NVHHMCRAFQ FSTGLSVMAY VRARRLSRAA
HVLADGEADI LTMALEAGYG SHEAFTRAFR AYLGVLPSQV KEACDLSNLS LMEPLKMDNS
RIIDVAKPEI RTREAFRVVG FGADVTGFDI SAIPGLWQRF AAQYQELGAD GVTYGVSYDI
GEDGDFRYIA GLEWPDVPDG MVTVDLPAAR YAVFTHDGHI GDLPKMIYTI WNKALPGSGL
EPATTPEFEL YDHRFNAVTG LGVVEHWVPL V
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