Gene Jann_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1951 
Symbol 
ID3934402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1943928 
End bp1944884 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content65% 
IMG OID637904305 
ProductPfkB 
Protein accessionYP_509893 
Protein GI89054442 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.194411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.943264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGA CTGCGCGCCG TCGTGGTGAT GATGCGGTCC GAGGCCCGGG GGGTGTGCTG 
GTGCTCGGGG CGGCCAGCTG GAACCGGATG ATCCATGTGG AAACGCTTCC ACAGGGGGCT
TCCGCCACGA TTTTCGACGC GCGCGAGACG CAGGGCGCCG GCTCCACCGG TGTGGGAAAG
GCGATGGGGC TGGCGGCCCT TGGATACCAG CCAACCCTCC ACTGCGCGCT TGGGCGAGAC
GATCACGGCG CGCAGGTGAT CGCGGCCTGC GCGGGGCGCG GCATCTCCCT GATCGTCGAT
GAGCATGACG CGGCAACTCC GCATCACCTG AACATCATGG ATCAGCTGGG TGGGCGGTAT
TCGCTGTTCC TGTCGAACGG CGCGCCTGAT CCGCCGATCA ATGAGCCCCG GATCGCAGAG
CAGATCGCGG CGGCCGATAC CATTTTTCTC AGCCTCTGCG CGTCATCGAA GAAGATCCTG
CATCTGCTGG AAGGTGCACG CGCCGAGATT CTGCTGGACT TGCACGATTA TGACGGGGCC
AACCCGTGGT ATGAGGACTT CATCGCCTGC GCCGATGTCA TTCAATTGTC CGATGTGGCT
GTGGCGGACC CCGGCGCGGT GGCGAGACGT TTGTTGTCGG GACGAGCACA TCAGGTTGTT
GTCACCAAAG CGGGGAAGGG GGCGGAGATC GTGACGGCGG ATACCAGCAT CGACGTCCCG
CCCTGTCCCG CAGATATGGT CGACAGCAAC GGGGCGGGCG ACGCATTCTC GGTCGCGTTG
TGGCACGCGC AAAGGACCGG GCAATCGGGT CTGGATGCGG GCGGGTTCGC GGCAGCGGCA
GCGGCCTGTG CAATCGAAAG CGCTGATCTT TTCCCGGTCA ATGTGTCGGC CGCCGACATT
GCGGGCCGTG TGCGGGCCCA TCCGCAGGAC CATTCGACCG GGACCGCCTC ACGGTAA
 
Protein sequence
MVKTARRRGD DAVRGPGGVL VLGAASWNRM IHVETLPQGA SATIFDARET QGAGSTGVGK 
AMGLAALGYQ PTLHCALGRD DHGAQVIAAC AGRGISLIVD EHDAATPHHL NIMDQLGGRY
SLFLSNGAPD PPINEPRIAE QIAAADTIFL SLCASSKKIL HLLEGARAEI LLDLHDYDGA
NPWYEDFIAC ADVIQLSDVA VADPGAVARR LLSGRAHQVV VTKAGKGAEI VTADTSIDVP
PCPADMVDSN GAGDAFSVAL WHAQRTGQSG LDAGGFAAAA AACAIESADL FPVNVSAADI
AGRVRAHPQD HSTGTASR