| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1944 |
|---|
| Symbol | |
|---|
| ID | 3934395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1934646 |
|---|
| End bp | 1935947 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637904298 |
|---|
| Product | Beta-glucosidase |
|---|
| Protein accession | YP_509886 |
|---|
| Protein GI | 89054435 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
|---|
| TIGRFAM ID | [TIGR03356] beta-galactosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.781532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA AACGCTCCGA TTTCCCGGAG GGCTTTCGCT TCGGGGTCGC GACCTCCGCC
TACCAGATCG AGGGGCACGC CCAGGGCGGC GCGGGCCTGA CCCATTGGGA CAGTTTTGCC
GCCACGCCCG GCAATGTCGT GCGGTTTGAG GACGGCGCGC GGGCCTGCGA CCACCTGAAC
CGGCTGGACG AGGATCTGGA CCTGATCCGC GATCTGGGCG CGGACGTCTA CCGGTTCTCC
ACCTCCTGGG CGCGGGTGAT GCCGGAGGGG CGTGGAGCGG CCAACAAGGA CGGCCTCGAT
TTCTACGATC GCCTCGTCGA TGGGCTGCTG GAGCGGGGCA TCGCGCCCGC CGTCACGCTC
TATCACTGGG AATTGCCGCA GGCGCTGGCC GATAGGGGCG GCTGGCGCAA CGCCGACATG
CCCGATTGGT TTGCCGACTA CACCGAGACC ATCATGTCCC GCATCGGCGA CCGCACCTGG
TCCGCCGCTC CGATCAATGA GCCGTGGTGC GTCAGTTGGC TGTCGCATTT TGAGGGCCAC
CACGCGCCGG GACTGCGTGA TATCCGCGCC ACCGCGCGGG CCATGCACCA CGTGCTGGTC
AGCCACGGGC GGTCGATCCA GGTCATGAAA GGTCTGGGCG TGAAAAACCT CGGGGCCGTG
TGCAATTTTG AATGGGCCAT GCCCAACACC GACAGCGATG CCGACATCGC CGCCGCCGCG
CGCTATGACG CGATCTACAA CCGCTTCTTT CTGGGCGGGC TGTTCAAGGG CGACTACCCG
GCAGAGGTGA TGGAGGGGTT GGAGCCCCAC CTGCCCGATG GCTGGCAGGA CGATTTCGCC
ACCATCCGCT CACCGCTCGA TTGGGTGGGG GTGAATTACT ACACCAACAA ACGCATCAGC
GCGACCGATG ACCCCTGGCC CGCCTATGCC TATGCGCCCA CCCAAGGCCC CCTGACCGAC
ATGGGGTGGG AGGTCTACCC GCAGGGGTTG CAGGATTTTC TGACCCGCAC CGCCCGCGAA
TACACTGGTG ATCTGCCGAT CTATGTCACC GAAAACGGCA TGGCGTCCGC CACCACGCCC
GACCCCGACC GGATCGCCTA TCTGACCGAC CACCTGCACA GCGTTCAGGC CGCGATTGCC
GACGGCGCCC CCGTTGCGGG CTATTACGTG TGGTCCCTGA TGGACAATTA TGAGTGGGCT
TTGGGATACG AGAAACGCTT CGGCCTCGTC CATGTGGATT TTGAGACCTT GGCACGGACG
CCCAAAGCGT CCTATCACGC ATTAGCAAAT TGGTGGCGCT GA
|
|---|
| Protein sequence | MDFKRSDFPE GFRFGVATSA YQIEGHAQGG AGLTHWDSFA ATPGNVVRFE DGARACDHLN
RLDEDLDLIR DLGADVYRFS TSWARVMPEG RGAANKDGLD FYDRLVDGLL ERGIAPAVTL
YHWELPQALA DRGGWRNADM PDWFADYTET IMSRIGDRTW SAAPINEPWC VSWLSHFEGH
HAPGLRDIRA TARAMHHVLV SHGRSIQVMK GLGVKNLGAV CNFEWAMPNT DSDADIAAAA
RYDAIYNRFF LGGLFKGDYP AEVMEGLEPH LPDGWQDDFA TIRSPLDWVG VNYYTNKRIS
ATDDPWPAYA YAPTQGPLTD MGWEVYPQGL QDFLTRTARE YTGDLPIYVT ENGMASATTP
DPDRIAYLTD HLHSVQAAIA DGAPVAGYYV WSLMDNYEWA LGYEKRFGLV HVDFETLART
PKASYHALAN WWR
|
|---|
| |