| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1940 |
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| Symbol | |
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| ID | 3934391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1930694 |
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| End bp | 1931428 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904294 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_509882 |
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| Protein GI | 89054431 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.331294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.596392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGAGA CGTCAGACAC AGACCCAAAC TCGGGCGCTC TGCCGACCTA TCTGCGCATC
GCGGAGGCGC TCACGATCGA CATTGGCGGG GGCCGTTTGT CCCCCGGTGA GAAGCTGCCC
CCCGAACGCG CCATGGCCAC CGAGCGCGGC GTGGCCGTGG CCACGCTGCG CAAGGCGCTG
CACCTTCTGG TTGAGCGCGG GCTGATCGAG CGGCGTCAGG GATCGGGCAA TTACGTGCTG
GGGGGCGGGT CCAATATCGG GACCTACGCG CTGTTCCGGC TGGAGCTGAA GGGGATTGGC
GGCGGGTTGC CCACGGCGAA ACTTCTGGAC ATCAGGAAGA CCAAAAAGCC CGACGATCTG
CCCAATATTG GCGGCACGTT CGACGTCGGC ATCCGGATGC GGCGGCTGCG GGCTCTCGCG
GATATCCCCG TCGCGGTGGA GGAGATCTGG CTGGACCTGC GCTGGCATGA CGACAACGGT
CTGAACGCGC GCACGGTCTC CGAATCGCTC TACCGGACCT ACGCCGACCG GCTGCACCTG
CATATCCAGC ACGCCGAGGA TGTGATCAGC GCGGGTCCCC TGCCCGATTG GACGCCCGAC
GAATTGGGCC TGGCGCCCGG CACCCAGGTG GGGTTCATCG AGCGGCGCGC CTATGACCAG
CACGGCCTGC CCTGCGAGGC ATCACGGACC TGGTTCGACC CGGACCGCGC GCAATATTTC
TCAAAAGTGC CCTGA
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| Protein sequence | MPETSDTDPN SGALPTYLRI AEALTIDIGG GRLSPGEKLP PERAMATERG VAVATLRKAL
HLLVERGLIE RRQGSGNYVL GGGSNIGTYA LFRLELKGIG GGLPTAKLLD IRKTKKPDDL
PNIGGTFDVG IRMRRLRALA DIPVAVEEIW LDLRWHDDNG LNARTVSESL YRTYADRLHL
HIQHAEDVIS AGPLPDWTPD ELGLAPGTQV GFIERRAYDQ HGLPCEASRT WFDPDRAQYF
SKVP
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