| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1935 |
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| Symbol | ispG |
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| ID | 3934386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1925523 |
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| End bp | 1926656 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904289 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_509877 |
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| Protein GI | 89054426 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.504865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCACA ATCCGATCCG CCCCTGGCGC AACATCGACC GGCGCAAGAG CCGCCAGATC
ATGGTCGGCA ACGTGCCGGT TGGCGGCGAC GCACCGATTA CCGTGCAGAC CATGACCAAC
ACGCTGACCA CCGATGCCAG CGCCACGATC AAACAGGTCA TCGCGGCGGC GGAGGCGGGG
GCGGATATCG TCCGTGTCTC TGTGCCGGAT GCGGATTCGG CCCGCGCGAT GCATGAGATT
TGCCGCGAAA GCCCGGTGCC CATCGTGGCC GACATCCACT TCCATTATAA GCGTGGGATC
GAGGCGGCCG AGGCGGGCGC GGCCTGCCTG CGGATCAATC CCGGCAACAT TGGCGACGCG
GCCCGTGTGA AAGAGGTCGT GAAGGCGGCG CGGGACCACA ATTGCTCCAT CCGCATCGGC
GTGAATGCGG GGTCGCTGGA AAAGCACCTG TTGGAGAAAT ACGGGGAGCC ATGCCCCGAT
GCCATGGTCG AGAGTGGCAT GGACCATATC AAGCTGTTGG AAGACAACGA CTTTCACGAG
TTCAAGATCT CCATGAAAGC CTCCGACATC TTCATGACTG CCGCCGCCTA TCAGCAACTC
GCCGACCAGA CCGATGCGCC GTTCCACATG GGGATCACGG AAGCAGGCGG GTTCGTGGGC
GGCACGGTGA AATCCGCCAT CGGCCTCGGC AACCTGCTTT GGGCGGGGAT TGGCGATACG
ATGCGCGTGT CGCTCTCCGC CGATCCGGTG GAGGAGGTGA AGATCGGGTT CGAGATCCTG
AAATCCCTTG GCCTGCGGCA CCGGGGCGTG AACATCATCT CCTGCCCGTC CTGTGCGCGG
CAGGGCTTCG ACGTGATCAA GACGGTGGAG GTGTTGGAAC AGCGGCTGGA GCATATCAAG
ACGCCCATGA GCCTCTCGAT CATCGGCTGC GTGGTGAACG GACCGGGAGA GGCGCTGATG
ACCGATGTGG GCTTCACCGG CGGCGGGGCG GGCAGCGGCA TGGTCTATCT GGCGGGCAAG
CAGAGCCACA AGATGAGCAA TGAGCAGATG GTCGATCACA TCGTCGAACA GGTCGAAAAA
CGCGCCGAGG CCATTGAGGC CCAGGCCAAA GCGGCAGACC AGGCCGCAGA ATAG
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| Protein sequence | MSHNPIRPWR NIDRRKSRQI MVGNVPVGGD APITVQTMTN TLTTDASATI KQVIAAAEAG
ADIVRVSVPD ADSARAMHEI CRESPVPIVA DIHFHYKRGI EAAEAGAACL RINPGNIGDA
ARVKEVVKAA RDHNCSIRIG VNAGSLEKHL LEKYGEPCPD AMVESGMDHI KLLEDNDFHE
FKISMKASDI FMTAAAYQQL ADQTDAPFHM GITEAGGFVG GTVKSAIGLG NLLWAGIGDT
MRVSLSADPV EEVKIGFEIL KSLGLRHRGV NIISCPSCAR QGFDVIKTVE VLEQRLEHIK
TPMSLSIIGC VVNGPGEALM TDVGFTGGGA GSGMVYLAGK QSHKMSNEQM VDHIVEQVEK
RAEAIEAQAK AADQAAE
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