| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1926 |
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| Symbol | |
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| ID | 3934377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1914397 |
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| End bp | 1915587 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637904280 |
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| Product | major facilitator transporter |
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| Protein accession | YP_509868 |
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| Protein GI | 89054417 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCCA CGCCCGCAAA GACCCCGCCC CGGCTTGTCA CGCTGATCCT GCTGGCGGCG
CTGTCGACGA TGACGCTCAA CATGATCCTG CCCTCGCTTG CGGCCATCGC CCGCACCTTT
GAGGCGGAAT ATGCCGTGGC GAGCCTTGCG ATCGGCGGCT ATCTGGCCGT GACCGCCGTG
GTGCAGCTGG TCGTGGGGCC GCTCTCGGAC CGGATCGGGC GGCGGCCGGT GCTCTTGGGG
GGCTTGGTCA TCTTCATCCT GGCCTCCGTC CTCTGCATGG TGGCGCAAAA CATCTGGGTG
TTCCTGGCCG CCCGTATGGC CCAGAGCGCC ATGTCGATGG GCTACGCGAT CTCCCTCGCC
GTCGTGCGCG ACACGACCGA GCCCCGCCGC GCCGCCTCGG TCATCGGCAC AATCGGGACG
ATCATGGCGA TCGCGCCGAT CCTGGGACCG GTCCTGGGCG GCGTGCTGGA CACGTATCTG
GGTTGGCGGG CGAGCTTCGT CGTCTATGCG CTCGCGGGCC TCGCCATGCT GGCCTGGTGC
TGGGTGGATC TGGGGGAAAC GCGCCCCGAG CGGGCCGATG CGCGCCCCTC AGCGGTCTCT
GCGGCGCGCA CGCTCCTGCG CCTGCCCGCC TTCCGCGCCT ATCTGGCCTG CACCGCGCTT
TCCACCGGCG GCTTCTTCGC CTTTCTTGCG GGCGTCCCCT TCGTGGCGAC CGAGACGTTC
GGCATCACCA CCGCACGCCT TGGGTTTTTC ATCGGCTCAA TCACTGCGGG GTATATGGCG
GGCAGTTTCA TCTCATCCCG GCTCGCGTCG GGCCTTGCGC TGTCGACGAT GATGCTGGCG
GGCCGGATCG TGGCCTGTAC CGGGCTAACA TGCGGCTTGA TCGCGCTGGC CTTCGGGATC
GTCACCCCCC TCACCTTCTT CGGCAGCACG ATCTGTGTGG GTATGGGCAA CGGCCTGACC
ATGCCGTCCA GCAATGCGGG TGCCATGTCC GTGCGGCCCG AGCTTGCGGG CAGTGCGGCG
GGCTTCACCG GGGCCGCCAC CGTGGCCTGC GGCGCGATCC TGACCAGCGT CGCGGGGATC
ATCGTCCCCG GCCCCCATGC GCCCGCCACC GTCCTCGCGC TTATGCTGGC GGCGTCGCTT
GCCGCACTTG TGGCCGCACT CGCCGCCCGT CGGCACGAAA CGACACCCTA G
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| Protein sequence | MIATPAKTPP RLVTLILLAA LSTMTLNMIL PSLAAIARTF EAEYAVASLA IGGYLAVTAV
VQLVVGPLSD RIGRRPVLLG GLVIFILASV LCMVAQNIWV FLAARMAQSA MSMGYAISLA
VVRDTTEPRR AASVIGTIGT IMAIAPILGP VLGGVLDTYL GWRASFVVYA LAGLAMLAWC
WVDLGETRPE RADARPSAVS AARTLLRLPA FRAYLACTAL STGGFFAFLA GVPFVATETF
GITTARLGFF IGSITAGYMA GSFISSRLAS GLALSTMMLA GRIVACTGLT CGLIALAFGI
VTPLTFFGST ICVGMGNGLT MPSSNAGAMS VRPELAGSAA GFTGAATVAC GAILTSVAGI
IVPGPHAPAT VLALMLAASL AALVAALAAR RHETTP
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