| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1925 |
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| Symbol | |
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| ID | 3934376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1912371 |
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| End bp | 1914332 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904279 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_509867 |
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| Protein GI | 89054416 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG ACCTCCTCTC CGGCGCGCCT GATGACCAGT CCTATGACGC CTCCTCCATC
GAGGTGCTGG AAGGGCTGGA GCCGGTCCGC AAACGCCCCG GCATGTATAT CGGCGGCACC
GATGAACGCG CGCTCCATCA CCTGGTCGCG GAAGTCCTCG ACAATTCCAT GGACGAGGCG
GTCGCAGGCT ACGCCACCCG CATCGAAGTC GAACTCCACG CCGACCACGC CGTCACCATC
CGTGACAACG GGCGCGGCAT GCCATTTGAC CCGCACCCCA AGTTTCCCGG CAAATCCGCC
CTCGAAGTGA TCCTCTGCAC CCTGCATGCG GGCGGCAAAT TCTCCGGCAA GGCCTACCAG
ACCTCGGGCG GCCTGCACGG CGTCGGCGCG TCGGTCGTCA ACGCGCTCTC GGACTCCATG
GTCGTGCAGG TGGCCCGTGA CCGCAAAGTG GTGGAACAAC GCTTCTCCCG TGGCCTGCCC
CTTGGCCCCG TCACCGAAAT CGGCGCCGCT CCCAACCGCC GTGGCACCAC GACCACCTTC
CACGCCGACG AACAGATTTT TGGGTCCCAC CGCTTCAAGC CCGCCCGCCT GATGAAGATG
GTGCAGTCCA AGGCCTACCT CTTCTCCGGC GTCGAAATCC GTTGGAAATC GGCCATCGAT
GACGGTGAGA CGCCCACGGA GGCCACCTTC CACTTCCCCG GTGGCCTGTC CGATTACCTC
ACGGAAACCC TCGGTAAAAC AGCCACTTAC ACAGAAATCC CCTTCGCGGG CAAAGTCGAA
TTCCAGCAAC GCTTCAACGT CCCCGGATCG GTCGAATGGG CGATCTCCTG GACGCCCGCG
CGCGACGGCT TCATCCAGTC GTTCTGCAAC ACCGTCCCCA CCCCCGAAGG CGGCACCCAT
GAGGCCGGGT TCTGGGCCGC GATCCTCAAA GGCATCCGCG CTTACGGAGA GCTGGCGGGC
AACAAGAAGG CCGCCAACAT CACCCGTGAT GACATCGCCA CCGGGGCGGG CGCGCTGGTG
TCGTGTTTCA TCGCCGAGCC GGAATTTGTC GGCCAGACCA AGGACCGTCT CGCCACGACG
GAGGCGCAGC GGCTGGTCGA ACAGGCCGTT CGCGATCATT TCGACAACTG GCTGGGGCAG
AACACGAAGG AGGCCGGGGC GATCCTCGAT TTCCTCGTGC TCCGCGCCGA AGAACGTCTG
CGCCGCCGGG CCGAGAAGGA AACGGCGCGC AAATCCGCCA CCAAAAAGCT GCGCCTGCCC
GGCAAGCTGG TCGATTGCTC CCAATCCGCG CGCGACGGCA CGGAATTGTT CATTGTGGAG
GGCGACTCGG CCGGCGGCTC CGCCAAGATG GCGCGTAACC GCAAGAACCA GGCCCTCCTG
CCCCTGCGCG GAAAAATCCT CAACGTGCTG GGGGCCGCCT CGGGCAAGCT GACCTCCAAC
GCCGAGATTT CCGATCTCTG CCAAGCCCTT GGCGTGGGCA TGGGCACCAA GTTCAATATC
GAGGATCTGC GCTACGACAA GATCATCATC ATGACCGACG CCGACGTCGA CGGCGCCCAT
ATCGCGGCGC TGCTGATGAC GTTCTTCTTC AGCCAGATGC GCCCGATGAT AGACGGCGGA
CACCTCTACC TGGCCTGCCC GCCGCTGTTT AGGCTGACCC AAGGCGCGCG CCGCGTCTAC
TGCCTGGATG AGCAGGAGCG GGATGAGATG ATGGAGAAGG GCTTGGGCGG CAAAGGCAAA
ATCGACGTCT CCCGGTTCAA GGGCCTGGGC GAGATGGACG CGAAGGACCT GAAAGAAACC
ACCATGGACC CGGAAAGCCG GAAGCTGATC CGGGTGTCCG TGGATGATGA CGTGCCGGGT
GAGACGGGCG ATCTGGTCGA ACGATTAATG GGCAAGAAAC CAGAGTTGCG GTTCCAGTAT
ATCCAGGAGA ACGCGCGGTT CGTGGAGGAG TTGGATGTTT AA
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| Protein sequence | MADDLLSGAP DDQSYDASSI EVLEGLEPVR KRPGMYIGGT DERALHHLVA EVLDNSMDEA
VAGYATRIEV ELHADHAVTI RDNGRGMPFD PHPKFPGKSA LEVILCTLHA GGKFSGKAYQ
TSGGLHGVGA SVVNALSDSM VVQVARDRKV VEQRFSRGLP LGPVTEIGAA PNRRGTTTTF
HADEQIFGSH RFKPARLMKM VQSKAYLFSG VEIRWKSAID DGETPTEATF HFPGGLSDYL
TETLGKTATY TEIPFAGKVE FQQRFNVPGS VEWAISWTPA RDGFIQSFCN TVPTPEGGTH
EAGFWAAILK GIRAYGELAG NKKAANITRD DIATGAGALV SCFIAEPEFV GQTKDRLATT
EAQRLVEQAV RDHFDNWLGQ NTKEAGAILD FLVLRAEERL RRRAEKETAR KSATKKLRLP
GKLVDCSQSA RDGTELFIVE GDSAGGSAKM ARNRKNQALL PLRGKILNVL GAASGKLTSN
AEISDLCQAL GVGMGTKFNI EDLRYDKIII MTDADVDGAH IAALLMTFFF SQMRPMIDGG
HLYLACPPLF RLTQGARRVY CLDEQERDEM MEKGLGGKGK IDVSRFKGLG EMDAKDLKET
TMDPESRKLI RVSVDDDVPG ETGDLVERLM GKKPELRFQY IQENARFVEE LDV
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