Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1923 |
Symbol | |
ID | 3934374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1910425 |
End bp | 1910853 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904277 |
Product | hypothetical protein |
Protein accession | YP_509865 |
Protein GI | 89054414 |
COG category | [S] Function unknown |
COG ID | [COG4319] Ketosteroid isomerase homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.92062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTT TTGCCCTCCT TCTCGCCCTC GTCTTCCCTC TCACAGCCCA GGCCCAGACC AACGACACCT CCAACCCGAT CATCGCCCGC ATGGCCGCGC TGGTGGACGC CTATAACGCG CAGGATCTGC AGGCCATCGG CGCGATCTAT CATCCGGAGG CCGCGTTGTT CGCACCCGGC GAGGCCGCGA TCCTTGGACG CGAGGCCATC ATGCAGCACT ACGCCGACGC CATCGCAGCG GGGGCCACCG AGGTGCAGTT CCGAACCTTT GATATCCGCC CTTCCGAGAT CATGGCCGTC GAGATTGGCG AGACCGTGGT GCAGGTCAGC GGAACCGGCG TCGTGACCCG CTACATGCAT GTGTGGGAGG TGGACGGCGA TCAGATCCTG CTGACCCGGG ACATGTATCA CGTGTTGGGC ACCCAATGA
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Protein sequence | MRVFALLLAL VFPLTAQAQT NDTSNPIIAR MAALVDAYNA QDLQAIGAIY HPEAALFAPG EAAILGREAI MQHYADAIAA GATEVQFRTF DIRPSEIMAV EIGETVVQVS GTGVVTRYMH VWEVDGDQIL LTRDMYHVLG TQ
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