Gene Jann_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1923 
Symbol 
ID3934374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1910425 
End bp1910853 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID637904277 
Producthypothetical protein 
Protein accessionYP_509865 
Protein GI89054414 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.92062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTT TTGCCCTCCT TCTCGCCCTC GTCTTCCCTC TCACAGCCCA GGCCCAGACC 
AACGACACCT CCAACCCGAT CATCGCCCGC ATGGCCGCGC TGGTGGACGC CTATAACGCG
CAGGATCTGC AGGCCATCGG CGCGATCTAT CATCCGGAGG CCGCGTTGTT CGCACCCGGC
GAGGCCGCGA TCCTTGGACG CGAGGCCATC ATGCAGCACT ACGCCGACGC CATCGCAGCG
GGGGCCACCG AGGTGCAGTT CCGAACCTTT GATATCCGCC CTTCCGAGAT CATGGCCGTC
GAGATTGGCG AGACCGTGGT GCAGGTCAGC GGAACCGGCG TCGTGACCCG CTACATGCAT
GTGTGGGAGG TGGACGGCGA TCAGATCCTG CTGACCCGGG ACATGTATCA CGTGTTGGGC
ACCCAATGA
 
Protein sequence
MRVFALLLAL VFPLTAQAQT NDTSNPIIAR MAALVDAYNA QDLQAIGAIY HPEAALFAPG 
EAAILGREAI MQHYADAIAA GATEVQFRTF DIRPSEIMAV EIGETVVQVS GTGVVTRYMH
VWEVDGDQIL LTRDMYHVLG TQ