| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1911 |
|---|
| Symbol | |
|---|
| ID | 3934362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1899487 |
|---|
| End bp | 1900623 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637904265 |
|---|
| Product | carboxylate-amine ligase |
|---|
| Protein accession | YP_509853 |
|---|
| Protein GI | 89054402 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2170] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.557399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA CGTTCTCGGA TGAGCACTTC ACCCTTGGGA TCGAGGAGGA GTACCTGCTC
GTCGACGCCG AGACCTATGA TCTGGCGGAG GCTCCCGATG CGCTTATGGC GGCCTGCGCG
GACAAACTGT CATCGAAGGT GAGCCCTGAA TTCCTGCAAT GCCAGATCGA AGTGGGCACC
GGGGTTTGCG CCAGTATCGC CGACGCGCGT GCAGATTTGC GCAATTTGCG TGCCACGGTC
GCGGAATGTG CGGGACGCTT TGGCCTCGCG CCCATCGCGG TGTCCTGCCA CCCCTTCGCC
GATTGGAAGG ATCAAAGCCA CACGGACAAG GACCGCTACA ACCAGCTTGC CCGCGACCTG
GGCGGTGTGG TGGAGCGGAT GCTGATCTGC GGCGCCCATT GCCATGTGGG CCTGCCATCC
GAGAATGACC GCGTCGATAT CATGCGGCAG ATGACCTATT TCCTGCCGCA CCTGCTGGCG
CTGTCCACGT CCTCTCCGTT CTGGCAGGGG CGCGATACGG GGTTGGCGTC CTACCGTCTG
ACGGTCTTTG ACAACCTGCC GCGCACGGGC CTGCCGCCGT CATTTGCGTC CTTTGACGAG
TTCCAGCGCA CCGTTGATCT GCTGGTCGAT ATGGAGATGA TCGAGGACAG CTCGAAGATC
TGGTGGGATC TGCGCCCCTC CGCGGCCTTC CCCACGCTGG AGACGCGGAT CTGCGATGTC
TCTCCCCGGC TGGAAGATCA GCTGTCGCTC AGCGCGCTGA TCCAATGCCT GACGCGGATG
CTAATGCGTC TGCGTGGATC GAACCAGCGC TGGCGGGTCT ATGATCGGTT CCTGATCAAT
GAAAATCGAT GGCGTGCGCA GCGATACGGG GTCAGCGACG GGCTGATTGA CTTCGGGCGC
GGCGCGGTGG TGCCGTTACC GGAACTGGTG GACGAGTTGA TCGAGTTGAC CGAACAGGAT
GCGGAGGCGT TGGGCTGTGT GGACGAGGTG CAGCGCCTGC GCGATCTTGC CGTCGAGACC
AGTTCAGATC GGCAACGTAA GATCTACAAG GGCACCCGCG CGGCAGGCGG GTCCCACCAA
GCCGCCATGC GCAGCGTGGT GGAGCATCTG TTGGAGGACT TCCATGTCGA CCTCTGA
|
|---|
| Protein sequence | MAQTFSDEHF TLGIEEEYLL VDAETYDLAE APDALMAACA DKLSSKVSPE FLQCQIEVGT
GVCASIADAR ADLRNLRATV AECAGRFGLA PIAVSCHPFA DWKDQSHTDK DRYNQLARDL
GGVVERMLIC GAHCHVGLPS ENDRVDIMRQ MTYFLPHLLA LSTSSPFWQG RDTGLASYRL
TVFDNLPRTG LPPSFASFDE FQRTVDLLVD MEMIEDSSKI WWDLRPSAAF PTLETRICDV
SPRLEDQLSL SALIQCLTRM LMRLRGSNQR WRVYDRFLIN ENRWRAQRYG VSDGLIDFGR
GAVVPLPELV DELIELTEQD AEALGCVDEV QRLRDLAVET SSDRQRKIYK GTRAAGGSHQ
AAMRSVVEHL LEDFHVDL
|
|---|
| |