| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1910 |
|---|
| Symbol | |
|---|
| ID | 3934361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1899091 |
|---|
| End bp | 1899465 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904264 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509852 |
|---|
| Protein GI | 89054401 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3759] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.724765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGAG CCGCCGCCGT CGTGATCGCC GTGATTGCGG CGGTGCACCT ATATATCGCC
TGGTTTGAAA TCTTCGCCTG GACCACCCGT GGCCCGGCTG TCTTTTCATC CTTCCCGCGA
GACTTGTTTG AAGAAACAAC CGCCATTGCA GCCAATCAGG GCCTCTATAA CGCGTTCCTG
TCAGCCGGTC TGATCTGGTC ATTGCTGATC CGCGAACAGA AGTGGCGCAT CAACGTGGGC
ATCTGCTTTC TGCTCTTCGT GATCGTGGCC GGGGTGTTCG GGGCCGTGAC CGTCTCCTCC
CGGATCATGC TGGTGCAGAC CGCGCCCGCG ACACTGGGTC TTGTGCTGCT GATGCTGGCG
CGGCGGCGGG TGTGA
|
|---|
| Protein sequence | MYRAAAVVIA VIAAVHLYIA WFEIFAWTTR GPAVFSSFPR DLFEETTAIA ANQGLYNAFL
SAGLIWSLLI REQKWRINVG ICFLLFVIVA GVFGAVTVSS RIMLVQTAPA TLGLVLLMLA
RRRV
|
|---|
| |