| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1889 |
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| Symbol | |
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| ID | 3934340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1878120 |
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| End bp | 1879382 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904243 |
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| Product | Rieske (2Fe-2S) protein |
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| Protein accession | YP_509831 |
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| Protein GI | 89054380 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.099621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0626613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCG GACCATGTCT GTCCGCGCCA AGGTTTTGTC GCTCTGCGGC AAGATTTCGA
GGCCGCGCGT GCCCAAGCTA CTCCTGTCCC CGACGACAGA CAGCAGGAGC GCCCGACATG
CCAGACGACC ACACCCGTTC GCTCGCCGAT GTCATGGCCC CAATCGATCG CGCGCGCGGT
CTGCCCAACA GCCATTACAC AGATCCCGAC ACAATCGCGG CAGAGAATGC CGCTGTCCTG
CACGCCGGAT GGGCCGCACT GGCCGTGGGG GCCGATGTGC CGGAACCGGG GGATGCGAAA
CCGTTTGAGT TCCTGGGCCA ACCGCTTCTG CTTCTGCGCG ATGACGACGG CGCCGTCCGT
GTCTTCTTCA ACATCTGCCG CCATCGCGGC ATGATCCTGG TGGATGCGCC ACGCAAGATC
GAAGGGGCGA TCCGCTGCCC CTACCATTCC TGGTGCTATG CCAAATCCGG CAAACTCGTC
GCCACGCCCC ATGTGGGTGG ACCGGGGCAG AACGCACACC CCGGGATTGA CCGCACCACC
CTTGGCCTGG CCGAGGTCCG CAGCCATATC TGGCGCGATG TGGTCTTCAT TAACCTCTCA
GGCGAGGCCG CCCCGTTTGA AGACGTCCAC GCCGATCTTC TGCAAAGGTG GGCGGAGTTC
GACCAACCCA TGCACCATGG CGGGCCCGAC AGCACCTTCA CGCTGGATCT GGCGACGAAC
TGGAAGCTGG CGGTGGAGAA TTACTGCGAA AGCTACCACC TGCCCTGGGT GCATCCGTCG
CTCAACACCT ACTCCCGGCT GGAGGATCAC TATCATATCG AGGCACCGGG CCAATTCTCG
GGCCAGGGCA CCTATGTCTA CCGCCAACTG ACCGGAGAGG ACGGCGCAAC TTTCCCCGAT
TTCGACGGTC TCAGCGCCCA TTGGGATGCG GGCGCAGAAT ACATCTCGGT CTTTCCCAAC
GTCCTGATGG GGGTTCACCG CGACCACGCC TATGCCATTG TGCTGGAGCC TGTGGCCCAC
AACCGCACCC GCGAACACGT CCACATATAC TACCCCAGCG CCGACACCGA CGCGGGCCTG
CGCGCCAAGA ATGCGCGGCA ATGGAAGGAT GTGTTCGAAG AAGACATCTT CGTGGTGGAA
GGCATGCAGA AGGGCCGCGC GGCGGATGGC TTTGACGGGG GCCGGTTTTC ACCCGCCATG
GACGGGCCGA CGCATCTGTT CCACGCCTGG GTCGCCGCGA AGCTGGACGC CCACGGGACC
TGA
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| Protein sequence | MKGGPCLSAP RFCRSAARFR GRACPSYSCP RRQTAGAPDM PDDHTRSLAD VMAPIDRARG
LPNSHYTDPD TIAAENAAVL HAGWAALAVG ADVPEPGDAK PFEFLGQPLL LLRDDDGAVR
VFFNICRHRG MILVDAPRKI EGAIRCPYHS WCYAKSGKLV ATPHVGGPGQ NAHPGIDRTT
LGLAEVRSHI WRDVVFINLS GEAAPFEDVH ADLLQRWAEF DQPMHHGGPD STFTLDLATN
WKLAVENYCE SYHLPWVHPS LNTYSRLEDH YHIEAPGQFS GQGTYVYRQL TGEDGATFPD
FDGLSAHWDA GAEYISVFPN VLMGVHRDHA YAIVLEPVAH NRTREHVHIY YPSADTDAGL
RAKNARQWKD VFEEDIFVVE GMQKGRAADG FDGGRFSPAM DGPTHLFHAW VAAKLDAHGT
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