| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1886 |
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| Symbol | |
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| ID | 3934337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1876744 |
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| End bp | 1877313 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904240 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_509828 |
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| Protein GI | 89054377 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.158781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.249624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTT TTCGTCTGTC CCTTGCCGCC GTTTGCGGCG TCCTGTTCGC TCTGCCTGCC
ACAGCCCAAA GCGGGTTGGA CCGGCTGGAC CGGGCGATGG GCGTGCTCGA TGGACGCGCG
GCCACGCAAT ACGAATTCTC CGATCGCTTG CGCCCGACCT CTGAAGCAGA GCGGGGTCTG
CCGGAATTTG AGGGCGGGTA TGACGGGCCG TTTCTGGAGG TTGCCCGTTC TGCGGCGCGC
CGCCACGGCG TGCCGGAGGA TTTGTTCCTG CGTCTTGTCC AGCAGGAATC GGGCTGGAAC
ACGGGCGCAC TCAGCAGCGC GGGCGCGATT GGTCTGGCGC AACTGATGCC CGACACCGCG
ACGCTTCTGG GCGTGGATCC GGCCGACCCG GTGGCCAACC TCGATGGCGG TGCGCGGTAT
CTTGCGCAGC AATTCCGCCG TTTCGGAAAC TGGCGTCTGG CGCTGGCCGC GTATAATGCG
GGCCCGGAGG CCGTCGTGCG CCATGACGGT GTGCCGCCCT TTGCCGAGAC CCAGCATTAT
GTCCGCGTGA TCCTTGGCAC CCGAAGCTGA
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| Protein sequence | MSRFRLSLAA VCGVLFALPA TAQSGLDRLD RAMGVLDGRA ATQYEFSDRL RPTSEAERGL
PEFEGGYDGP FLEVARSAAR RHGVPEDLFL RLVQQESGWN TGALSSAGAI GLAQLMPDTA
TLLGVDPADP VANLDGGARY LAQQFRRFGN WRLALAAYNA GPEAVVRHDG VPPFAETQHY
VRVILGTRS
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